RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 HOXA10P31260 410 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 GRIK1P39086 918 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 ZNF165P49910 485 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 CLCQ05315 142 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 INTS5Q6P9B9 1019 aaKnown RBP5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 RIN3Q8TB24 985 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 XAGE3Q8WTP9 111 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 DPH2Q9BQC3 489 aaPredicted RBP5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 ACBD3Q9H3P7 528 aa5.85□□□□□ -1.47
CKS1BP3-201ENST00000600888 CLASP1Q7Z460 1538 aa5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 SYNJ2O15056 1496 aa5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 MED26O95402 600 aa5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 YARSP54577 528 aaKnown RBP5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 GK5Q6ZS86 529 aa5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 FAM13CQ8NE31 585 aa5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 HEXIM2Q96MH2 286 aaKnown RBP5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 MIPEPQ99797 713 aa5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 LRRC4CQ9HCJ2 640 aa5.84□□□□□ -1.47
CKS1BP3-201ENST00000600888 SLC22A31A6NKX4 558 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 DNAJA2O60884 412 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 SSTR4P31391 388 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 CD97P48960 835 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 MLECQ14165 292 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 LETMD1Q6P1Q0 360 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 SLFN12Q8IYM2 578 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 RASGRP4Q8TDF6 673 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 GPRASP2Q96D09 838 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 SPATA32Q96LK8 384 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 CCSER2Q9H7U1 834 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 KLHL3Q9UH77 587 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 GTF2IRD1Q9UHL9 959 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 ERICH3Q5RHP9 1530 aa5.83□□□□□ -1.48
CKS1BP3-201ENST00000600888 CNTNAP4Q9C0A0 1308 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 ADAMTS12P58397 1594 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 GJA8P48165 433 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 TNNI2P48788 182 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 CDH24Q86UP0 819 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 FAM181AQ8N9Y4 354 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 GINM1Q9NU53 330 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 ZC3H7BQ9UGR2 993 aaKnown RBP5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 TPX2Q9ULW0 747 aaKnown RBP5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 CEP131Q9UPN4 1083 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 INPP5FQ9Y2H2 1132 aa5.82□□□□□ -1.48
CKS1BP3-201ENST00000600888 IGF2BP3O00425 579 aaKnown RBP eCLIP5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 HYAL3O43820 417 aaPredicted RBP5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 OXCT1P55809 520 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 COL9A2Q14055 689 aaPredicted RBP5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 LRP8Q14114 963 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 MSMPQ1L6U9 139 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 LRRFIP1Q32MZ4 808 aaKnown RBP5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 PPP1R13LQ8WUF5 828 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 CYB5D2Q8WUJ1 264 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 ANTXR1Q9H6X2 564 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 MKNK2Q9HBH9 465 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 PRDM5Q9NQX1 630 aaPredicted RBP5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 GMIPQ9P107 970 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 EFR3BQ9Y2G0 817 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 U3KQE9 123 aa5.81□□□□□ -1.48
CKS1BP3-201ENST00000600888 GRIN2AQ12879 1464 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 KIAA1324LA8MWY0 1029 aaPredicted RBP5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 SOX9P48436 509 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 ARSHQ5FYA8 562 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 ARTNQ5T4W7 220 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 CDCP2Q5VXM1 449 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 ZNF746Q6NUN9 644 aaPredicted RBP5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 DTX1Q86Y01 620 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 PHACTR4Q8IZ21 702 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 DNAJB8Q8NHS0 232 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 BAHD1Q8TBE0 780 aaPredicted RBP5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 ATG4CQ96DT6 458 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 CCDC74BQ96LY2 380 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 FERD3LQ96RJ6 166 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 KIF2CQ99661 725 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 ZNRF3Q9ULT6 936 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 PPT2Q9UMR5 302 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 MAPK8IP1Q9UQF2 711 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 FHAD1B1AJZ9 1412 aa5.8□□□□□ -1.48
CKS1BP3-201ENST00000600888 SHROOM2Q13796 1616 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 SCO2A0A1W2PP80 73 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 RGS13O14921 159 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 IMPDH2P12268 514 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 RAG1P15918 1043 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 SPINK2P20155 84 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 CYP7A1P22680 504 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 SFRP5Q5T4F7 317 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 OVOS1Q6IE37 1185 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 ARHGAP27Q6ZUM4 889 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 PLD6Q8N2A8 252 aaKnown RBP5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 NETO1Q8TDF5 533 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 TMEM40Q8WWA1 233 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 SEC16BQ96JE7 1060 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 CNNM2Q9H8M5 875 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 PCMTD2Q9NV79 361 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 PLAGL2Q9UPG8 496 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 NUP160Q12769 1436 aa5.79□□□□□ -1.48
CKS1BP3-201ENST00000600888 ARAP1Q96P48 1450 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 MEIS3P2A8K0S8 358 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 GNAT3A8MTJ3 354 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 PRR33A8MZF0 331 aa5.78□□□□□ -1.48
CKS1BP3-201ENST00000600888 RBAK-RBAKDNI3L0D1 243 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms