RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MYH8P13535 1937 aa22.36■■□□□ 1.17
CCDC9-205ENST00000600117 H0YGN5 161 aa22.36■■□□□ 1.17
CCDC9-205ENST00000600117 CYP21A2P08686 494 aa22.36■■□□□ 1.17
CCDC9-205ENST00000600117 JAG1P78504 1218 aa22.36■■□□□ 1.17
CCDC9-205ENST00000600117 IMMTQ16891 758 aaKnown RBP22.36■■□□□ 1.17
CCDC9-205ENST00000600117 SHROOM1Q2M3G4 852 aaPredicted RBP22.36■■□□□ 1.17
CCDC9-205ENST00000600117 NOL9Q5SY16 702 aaKnown RBP22.36■■□□□ 1.17
CCDC9-205ENST00000600117 ZKSCAN4Q969J2 545 aaPredicted RBP22.36■■□□□ 1.17
CCDC9-205ENST00000600117 OTUD5Q96G74 571 aa22.36■■□□□ 1.17
CCDC9-205ENST00000600117 INCENPQ9NQS7 918 aa22.36■■□□□ 1.17
CCDC9-205ENST00000600117 TAF6LQ9Y6J9 622 aa22.36■■□□□ 1.17
CCDC9-205ENST00000600117 EPB41L2O43491 1005 aaKnown RBP22.35■■□□□ 1.17
CCDC9-205ENST00000600117 CTNND1O60716 968 aaKnown RBP22.35■■□□□ 1.17
CCDC9-205ENST00000600117 SEC24BO95487 1268 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 SLC3A2P08195 630 aaKnown RBP22.35■■□□□ 1.17
CCDC9-205ENST00000600117 RASA1P20936 1047 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 CAP2P40123 477 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 VGLL4Q14135 290 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 STAG1Q8WVM7 1258 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 OPTNQ96CV9 577 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 MS4A4AQ96JQ5 239 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 SNCAIPQ9Y6H5 919 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 ATAD5Q96QE3 1844 aa22.35■■□□□ 1.17
CCDC9-205ENST00000600117 SLC27A2O14975 620 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 GDF11O95390 407 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 PDE4BQ07343 736 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 CERKLQ49MI3 558 aaPredicted RBP22.34■■□□□ 1.17
CCDC9-205ENST00000600117 AKNAD1Q5T1N1 836 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 CREB3L3Q68CJ9 461 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 USP26Q9BXU7 913 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 ELP3Q9H9T3 547 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 ZFYVE28Q9HCC9 887 aa22.34■■□□□ 1.17
CCDC9-205ENST00000600117 ORC4O43929 436 aa22.33■■□□□ 1.17
CCDC9-205ENST00000600117 PRDM1O75626 825 aa22.33■■□□□ 1.17
CCDC9-205ENST00000600117 TAF1CQ15572 869 aaPredicted RBP22.33■■□□□ 1.17
CCDC9-205ENST00000600117 SCYL3Q8IZE3 742 aa22.33■■□□□ 1.17
CCDC9-205ENST00000600117 GREB1LQ9C091 1923 aaPredicted RBP22.32■■□□□ 1.16
CCDC9-205ENST00000600117 AKR1B1P15121 316 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 NKX2-3Q8TAU0 364 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 BRI3BPQ8WY22 251 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 CCDC17Q96LX7 622 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 MKNK2Q9HBH9 465 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 ZNF287Q9HBT7 754 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.32■■□□□ 1.16
CCDC9-205ENST00000600117 ZBTB21Q9ULJ3 1066 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 CSADQ9Y600 493 aa22.32■■□□□ 1.16
CCDC9-205ENST00000600117 NEDD4P46934 1319 aa22.31■■□□□ 1.16
CCDC9-205ENST00000600117 PCP11498 1178 aaKnown RBP22.31■■□□□ 1.16
CCDC9-205ENST00000600117 ABCB5Q2M3G0 1257 aa22.31■■□□□ 1.16
CCDC9-205ENST00000600117 STOX1Q6ZVD7 989 aa22.31■■□□□ 1.16
CCDC9-205ENST00000600117 KCNB2Q92953 911 aa22.31■■□□□ 1.16
CCDC9-205ENST00000600117 RNF41Q9H4P4 317 aaPredicted RBP22.31■■□□□ 1.16
CCDC9-205ENST00000600117 GINM1Q9NU53 330 aa22.31■■□□□ 1.16
CCDC9-205ENST00000600117 PHIPQ8WWQ0 1821 aa22.3■■□□□ 1.16
CCDC9-205ENST00000600117 CCL15-CCL14A0A0B4J2E2 113 aa22.3■■□□□ 1.16
CCDC9-205ENST00000600117 GH2P01242 217 aa22.3■■□□□ 1.16
CCDC9-205ENST00000600117 GUCY1A2P33402 732 aa22.3■■□□□ 1.16
CCDC9-205ENST00000600117 HSPA4P34932 840 aa22.3■■□□□ 1.16
CCDC9-205ENST00000600117 CCL15Q16663 113 aa22.3■■□□□ 1.16
CCDC9-205ENST00000600117 MFSD6Q6ZSS7 791 aa22.3■■□□□ 1.16
CCDC9-205ENST00000600117 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.3■■□□□ 1.16
CCDC9-205ENST00000600117 SPDYE5A6NIY4 337 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 E7EWF7 191 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 EIF5BO60841 1220 aaKnown RBP22.29■■□□□ 1.16
CCDC9-205ENST00000600117 ASNSP08243 561 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 PTPRAP18433 802 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 GTF2A2P52657 109 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 CHRDL2Q6WN34 429 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 CCDC84Q86UT8 332 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-205ENST00000600117 RASEFQ8IZ41 740 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 ZNF444Q8N0Y2 327 aaPredicted RBP22.29■■□□□ 1.16
CCDC9-205ENST00000600117 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
CCDC9-205ENST00000600117 PLIN4Q96Q06 1357 aa22.28■■□□□ 1.16
CCDC9-205ENST00000600117 MYCP01106 439 aaPredicted RBP22.28■■□□□ 1.16
CCDC9-205ENST00000600117 TSGA10IPQ3SY00 556 aa22.28■■□□□ 1.16
CCDC9-205ENST00000600117 ERO1BQ86YB8 467 aa22.28■■□□□ 1.16
CCDC9-205ENST00000600117 SH3TC2Q8TF17 1288 aa22.28■■□□□ 1.16
CCDC9-205ENST00000600117 PICK1Q9NRD5 415 aa22.28■■□□□ 1.16
CCDC9-205ENST00000600117 LAMA3Q16787 3333 aa22.28■■□□□ 1.16
CCDC9-205ENST00000600117 ZSWIM8A7E2V4 1837 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 IGKV6D-41A0A0C4DH26 115 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 MPHOSPH10O00566 681 aaKnown RBP22.27■■□□□ 1.16
CCDC9-205ENST00000600117 SEPT2Q15019 361 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 FAM47AQ5JRC9 791 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 RNF20Q5VTR2 975 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 TMEM179Q6ZVK1 233 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 FAM43AQ8N2R8 423 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 NEDD1Q8NHV4 660 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 CABP5Q9NP86 173 aa22.27■■□□□ 1.16
CCDC9-205ENST00000600117 GNRH1P01148 92 aa22.26■■□□□ 1.15
CCDC9-205ENST00000600117 TFAP4Q01664 338 aa22.26■■□□□ 1.15
CCDC9-205ENST00000600117 PPATQ06203 517 aa22.26■■□□□ 1.15
CCDC9-205ENST00000600117 KIF22Q14807 665 aa22.26■■□□□ 1.15
CCDC9-205ENST00000600117 RRP12Q5JTH9 1297 aaKnown RBP22.26■■□□□ 1.15
CCDC9-205ENST00000600117 CNNM2Q9H8M5 875 aa22.26■■□□□ 1.15
CCDC9-205ENST00000600117 TOMM22Q9NS69 142 aa22.26■■□□□ 1.15
CCDC9-205ENST00000600117 RBM27Q9P2N5 1060 aaKnown RBP22.26■■□□□ 1.15
CCDC9-205ENST00000600117 USP17L5A8MUK1 530 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 B4E1Z4 1266 aa22.25■■□□□ 1.15
CCDC9-205ENST00000600117 RANBP6O60518 1105 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms