RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CNTNAP5Q8WYK1 1306 aa26.03■■□□□ 1.76
SRRM1-222ENST00000596378 DDAH1O94760 285 aa26.03■■□□□ 1.76
SRRM1-222ENST00000596378 GTF2F1P35269 517 aaKnown RBP eCLIP26.03■■□□□ 1.76
SRRM1-222ENST00000596378 ARPP21Q9UBL0 812 aaPredicted RBP26.03■■□□□ 1.76
SRRM1-222ENST00000596378 NEMFO60524 1076 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 CALM1P0DP23 149 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 CALM2P0DP24 149 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 CALM3P0DP25 149 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 TNNT1P13805 278 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 TSPY2A6NKD2 308 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 MYL5Q02045 173 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 POSTNQ15063 836 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 DIXDC1Q155Q3 683 aa26.02■■□□□ 1.76
SRRM1-222ENST00000596378 OSBPL5Q9H0X9 879 aaPredicted RBP26.02■■□□□ 1.76
SRRM1-222ENST00000596378 VEGFAP15692 232 aaPredicted RBP26.01■■□□□ 1.75
SRRM1-222ENST00000596378 GRAPQ13588 217 aa26.01■■□□□ 1.75
SRRM1-222ENST00000596378 NPY5RQ15761 445 aa26.01■■□□□ 1.75
SRRM1-222ENST00000596378 CNBD1Q8NA66 436 aa26.01■■□□□ 1.75
SRRM1-222ENST00000596378 GRAPLQ8TC17 118 aaPredicted RBP26.01■■□□□ 1.75
SRRM1-222ENST00000596378 DPF2Q92785 391 aa26.01■■□□□ 1.75
SRRM1-222ENST00000596378 CEP131Q9UPN4 1083 aa26.01■■□□□ 1.75
SRRM1-222ENST00000596378 TRIM75PA6NK02 468 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 ZNF827Q17R98 1081 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 OLFM4Q6UX06 510 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 CTCFLQ8NI51 663 aaPredicted RBP26■■□□□ 1.75
SRRM1-222ENST00000596378 DYNLL2Q96FJ2 89 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 LRRC4BQ9NT99 713 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 MAN1B1Q9UKM7 699 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 PTPN21Q16825 1174 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 SBK1Q52WX2 424 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 ARMCX5Q6P1M9 558 aa26■■□□□ 1.75
SRRM1-222ENST00000596378 SH3RF3Q8TEJ3 882 aaPredicted RBP26■■□□□ 1.75
SRRM1-222ENST00000596378 RCSD1Q6JBY9 416 aa25.99■■□□□ 1.75
SRRM1-222ENST00000596378 ZNF579Q8NAF0 562 aaKnown RBP25.99■■□□□ 1.75
SRRM1-222ENST00000596378 TRMT1Q9NXH9 659 aaKnown RBP25.99■■□□□ 1.75
SRRM1-222ENST00000596378 ADAMTS3O15072 1205 aa25.99■■□□□ 1.75
SRRM1-222ENST00000596378 LDHBP07195 334 aaKnown RBP25.99■■□□□ 1.75
SRRM1-222ENST00000596378 GSDMDP57764 484 aa25.99■■□□□ 1.75
SRRM1-222ENST00000596378 HSP90AA4PQ58FG1 418 aa25.99■■□□□ 1.75
SRRM1-222ENST00000596378 EPSTI1Q96J88 318 aa25.99■■□□□ 1.75
SRRM1-222ENST00000596378 FANCLQ9NW38 375 aa25.99■■□□□ 1.75
SRRM1-222ENST00000596378 IMPACTQ9P2X3 320 aa25.99■■□□□ 1.75
SRRM1-222ENST00000596378 A0A087X0B3 334 aa25.98■■□□□ 1.75
SRRM1-222ENST00000596378 ACTN4O43707 911 aaKnown RBP25.98■■□□□ 1.75
SRRM1-222ENST00000596378 USP5P45974 858 aa25.98■■□□□ 1.75
SRRM1-222ENST00000596378 SPTY2D1Q68D10 685 aaPredicted RBP25.98■■□□□ 1.75
SRRM1-222ENST00000596378 ZNF174Q15697 407 aa25.98■■□□□ 1.75
SRRM1-222ENST00000596378 TNFRSF25Q93038 417 aa25.98■■□□□ 1.75
SRRM1-222ENST00000596378 ZNF710Q8N1W2 664 aa25.97■■□□□ 1.75
SRRM1-222ENST00000596378 PDCL3Q9H2J4 239 aa25.97■■□□□ 1.75
SRRM1-222ENST00000596378 SERPINC1P01008 464 aa25.97■■□□□ 1.75
SRRM1-222ENST00000596378 TFAP4Q01664 338 aa25.97■■□□□ 1.75
SRRM1-222ENST00000596378 MKRN1Q9UHC7 482 aaKnown RBP25.97■■□□□ 1.75
SRRM1-222ENST00000596378 HOOK1Q9UJC3 728 aaKnown RBP25.97■■□□□ 1.75
SRRM1-222ENST00000596378 PRR5LQ6MZQ0 368 aa25.96■■□□□ 1.75
SRRM1-222ENST00000596378 DHX58Q96C10 678 aa25.96■■□□□ 1.75
SRRM1-222ENST00000596378 IL17RBQ9NRM6 502 aa25.96■■□□□ 1.75
SRRM1-222ENST00000596378 UBASH3AP57075 661 aa25.96■■□□□ 1.75
SRRM1-222ENST00000596378 C12orf60Q5U649 245 aa25.96■■□□□ 1.75
SRRM1-222ENST00000596378 ELOA2Q8IYF1 753 aaPredicted RBP25.96■■□□□ 1.75
SRRM1-222ENST00000596378 ZNF592Q92610 1267 aa25.96■■□□□ 1.75
SRRM1-222ENST00000596378 GJD4Q96KN9 370 aaPredicted RBP25.96■■□□□ 1.75
SRRM1-222ENST00000596378 LEMD3Q9Y2U8 911 aa25.96■■□□□ 1.75
SRRM1-222ENST00000596378 XDHP47989 1333 aa25.95■■□□□ 1.75
SRRM1-222ENST00000596378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.95■■□□□ 1.74
SRRM1-222ENST00000596378 FMR1Q06787 632 aaKnown RBP eCLIP25.95■■□□□ 1.741e-6■■□□□ 12
SRRM1-222ENST00000596378 WDR66Q8TBY9 1149 aa25.95■■□□□ 1.74
SRRM1-222ENST00000596378 SMARCE1Q969G3 411 aa25.95■■□□□ 1.74
SRRM1-222ENST00000596378 BRMS1Q9HCU9 246 aa25.95■■□□□ 1.74
SRRM1-222ENST00000596378 SCG2P13521 617 aa25.94■■□□□ 1.74
SRRM1-222ENST00000596378 GPSM2P81274 684 aa25.94■■□□□ 1.74
SRRM1-222ENST00000596378 TRMT44Q8IYL2 757 aaKnown RBP25.94■■□□□ 1.74
SRRM1-222ENST00000596378 SLC44A5Q8NCS7 719 aa25.94■■□□□ 1.74
SRRM1-222ENST00000596378 ARID3AQ99856 593 aa25.94■■□□□ 1.74
SRRM1-222ENST00000596378 TMEM232C9JQI7 657 aa25.94■■□□□ 1.74
SRRM1-222ENST00000596378 SARSP49591 514 aaKnown RBP25.94■■□□□ 1.74
SRRM1-222ENST00000596378 CFAP100Q494V2 611 aa25.94■■□□□ 1.74
SRRM1-222ENST00000596378 CCAR2Q8N163 923 aaKnown RBP25.94■■□□□ 1.74
SRRM1-222ENST00000596378 TGFBRAP1Q8WUH2 860 aa25.94■■□□□ 1.74
SRRM1-222ENST00000596378 SYMPKQ92797 1274 aaKnown RBP25.94■■□□□ 1.74
SRRM1-222ENST00000596378 USP17L3A6NCW0 530 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 USP17L4A6NCW7 530 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 SFPQP23246 707 aaKnown RBP eCLIP25.93■■□□□ 1.74
SRRM1-222ENST00000596378 CASP1P29466 404 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 TTC38Q5R3I4 469 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 NT5DC1Q5TFE4 455 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 PIK3AP1Q6ZUJ8 805 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 USP17L1Q7RTZ2 530 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 NLRP5P59047 1200 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 MORC3Q14149 939 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 CEP135Q66GS9 1140 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 STAG2Q8N3U4 1231 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 CCDC150Q8NCX0 1101 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 KAT14Q9H8E8 782 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 SAP30BPQ9UHR5 308 aaKnown RBP25.93■■□□□ 1.74
SRRM1-222ENST00000596378 MTMR7Q9Y216 660 aa25.93■■□□□ 1.74
SRRM1-222ENST00000596378 AFMP43652 599 aa25.92■■□□□ 1.74
SRRM1-222ENST00000596378 ZNF804AQ7Z570 1209 aa25.92■■□□□ 1.74
SRRM1-222ENST00000596378 RPGRQ92834 1020 aaKnown RBP25.92■■□□□ 1.74
SRRM1-222ENST00000596378 PFKFB3Q16875 520 aaPredicted RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms