RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 HERC5Q9UII4 1024 aaKnown RBP11.44□□□□□ -0.58
DDX39A-220ENST00000593008 KCNH4Q9UQ05 1017 aa11.44□□□□□ -0.58
DDX39A-220ENST00000593008 B4E1Z4 1266 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 PDHXO00330 501 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 ZNF213O14771 459 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 RASA1P20936 1047 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 CAP2P40123 477 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 ANTXR2P58335 489 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 MOGSQ13724 837 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 IMMTQ16891 758 aaKnown RBP11.43□□□□□ -0.58
DDX39A-220ENST00000593008 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 CYB5R4Q7L1T6 521 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
DDX39A-220ENST00000593008 FOXP4Q8IVH2 680 aaPredicted RBP11.43□□□□□ -0.58
DDX39A-220ENST00000593008 KCNB2Q92953 911 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 DDRGK1Q96HY6 314 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 ZKSCAN3Q9BRR0 538 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX39A-220ENST00000593008 LRRC2Q9BYS8 371 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 C22orf23Q9BZE7 217 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 ZFYVE28Q9HCC9 887 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 TOMM22Q9NS69 142 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 SERPINB13Q9UIV8 391 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 ANAPC4Q9UJX5 808 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 AFG3L2Q9Y4W6 797 aa11.43□□□□□ -0.58
DDX39A-220ENST00000593008 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 CXCL11O14625 94 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 ECM2O94769 699 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-220ENST00000593008 SPP2Q13103 211 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 AKNAD1Q5T1N1 836 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 TTC6Q86TZ1 520 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 MB21D2Q8IYB1 491 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-220ENST00000593008 CD99L2Q8TCZ2 262 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 JAKMIP1Q96N16 626 aaKnown RBP11.42□□□□□ -0.58
DDX39A-220ENST00000593008 TBC1D32Q96NH3 1257 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 UPF3BQ9BZI7 483 aaKnown RBP11.42□□□□□ -0.58
DDX39A-220ENST00000593008 EHD4Q9H223 541 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 SENP2Q9HC62 589 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
DDX39A-220ENST00000593008 GREB1LQ9C091 1923 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-220ENST00000593008 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-220ENST00000593008 KDM4AO75164 1064 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 CYP2C8P10632 490 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 CAP1Q01518 475 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
DDX39A-220ENST00000593008 GPAT2Q6NUI2 795 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-220ENST00000593008 ANKRD23Q86SG2 305 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 METTL16Q86W50 562 aaKnown RBP11.41□□□□□ -0.58
DDX39A-220ENST00000593008 CHMP4CQ96CF2 233 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 ATAD5Q96QE3 1844 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 MYH8P13535 1937 aa11.41□□□□□ -0.58
DDX39A-220ENST00000593008 DOCK1Q14185 1865 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 USP17L5A8MUK1 530 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 MPHOSPH10O00566 681 aaKnown RBP11.4□□□□□ -0.58
DDX39A-220ENST00000593008 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
DDX39A-220ENST00000593008 TLR2O60603 784 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 GH2P01242 217 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 FGRP09769 529 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 HMGCS2P54868 508 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 SP3Q02447 781 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 SEPT2Q15019 361 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 TATDN1Q6P1N9 297 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 MFSD6Q6ZSS7 791 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 FASTKD5Q7L8L6 764 aaKnown RBP11.4□□□□□ -0.58
DDX39A-220ENST00000593008 RAB11FIP4Q86YS3 637 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 AMOTL1Q8IY63 956 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 LARP6Q9BRS8 491 aaKnown RBP11.4□□□□□ -0.58
DDX39A-220ENST00000593008 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 ZBTB21Q9ULJ3 1066 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 TRIM17Q9Y577 477 aa11.4□□□□□ -0.58
DDX39A-220ENST00000593008 ORC4O43929 436 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 DTNBO60941 627 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 ASNSP08243 561 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 CASTP20810 708 aaKnown RBP11.39□□□□□ -0.59
DDX39A-220ENST00000593008 RBM25P49756 843 aaKnown RBP11.39□□□□□ -0.59
DDX39A-220ENST00000593008 TFAP4Q01664 338 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 MTMR2Q13614 643 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 CERKLQ49MI3 558 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-220ENST00000593008 TREML2Q5T2D2 321 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 ERO1AQ96HE7 468 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 ARHGAP39Q9C0H5 1083 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 MKNK2Q9HBH9 465 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 ZCCHC17Q9NP64 241 aaKnown RBP11.39□□□□□ -0.59
DDX39A-220ENST00000593008 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
DDX39A-220ENST00000593008 IGKV6D-41A0A0C4DH26 115 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 PRC1O43663 620 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 CD2BP2O95400 341 aaKnown RBP11.38□□□□□ -0.59
DDX39A-220ENST00000593008 MCCP23508 829 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 PDE4BQ07343 736 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 RAB3GAP1Q15042 981 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 ABCB5Q2M3G0 1257 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
DDX39A-220ENST00000593008 OTOP1Q7RTM1 612 aa11.38□□□□□ -0.59
DDX39A-220ENST00000593008 LRRC47Q8N1G4 583 aaKnown RBP11.38□□□□□ -0.59
DDX39A-220ENST00000593008 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms