RNA–Protein interactions for RNA: ENST00000592194.1

PRKAR1A-220, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 2

Gene PRKAR1A, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-220ENST00000592194 TMED8Q6PL24 325 aaPredicted RBP16.5■□□□□ 0.23
PRKAR1A-220ENST00000592194 DPF3Q92784 378 aa16.5■□□□□ 0.23
PRKAR1A-220ENST00000592194 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
PRKAR1A-220ENST00000592194 CRISPLD2Q9H0B8 497 aa16.5■□□□□ 0.23
PRKAR1A-220ENST00000592194 TXNRD2Q9NNW7 524 aa16.5■□□□□ 0.23
PRKAR1A-220ENST00000592194 TMOD4Q9NZQ9 345 aa16.5■□□□□ 0.23
PRKAR1A-220ENST00000592194 RBPJLQ9UBG7 517 aa16.5■□□□□ 0.23
PRKAR1A-220ENST00000592194 USP5P45974 858 aa16.49■□□□□ 0.23
PRKAR1A-220ENST00000592194 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRKAR1A-220ENST00000592194 CERS3Q8IU89 383 aa16.49■□□□□ 0.23
PRKAR1A-220ENST00000592194 DEFB118Q96PH6 123 aa16.49■□□□□ 0.23
PRKAR1A-220ENST00000592194 EHD4Q9H223 541 aa16.49■□□□□ 0.23
PRKAR1A-220ENST00000592194 GH2P01242 217 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 TFRCP02786 760 aaKnown RBP16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 PLCD1P51178 756 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 HERVK_113P62684 666 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 IRX3P78415 501 aaPredicted RBP16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 NUCB1Q02818 461 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 USP17L2Q6R6M4 530 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 SKAP1Q86WV1 359 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 TRIM34Q9BYJ4 488 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 BOLA2Q9H3K6 86 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 SERPINB13Q9UIV8 391 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 TAOK2Q9UL54 1235 aa16.48■□□□□ 0.23
PRKAR1A-220ENST00000592194 C19orf67A6NJJ6 358 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 FARP2O94887 1054 aaPredicted RBP16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 NEFLP07196 543 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 TRIM32Q13049 653 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 TTC6Q86TZ1 520 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 GPRC5AQ8NFJ5 357 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 C12orf42Q96LP6 360 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 HTATIP2Q9BUP3 242 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 ALPK3Q96L96 1907 aa16.47■□□□□ 0.23
PRKAR1A-220ENST00000592194 RPTORQ8N122 1335 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 TCRBV5S4A2TA0A5A2 114 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 HMGCRP04035 888 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 CHGBP05060 677 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 ATP5JP18859 108 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 CYP2B6P20813 491 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 PDE4AP27815 886 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 GUCY1A2P33402 732 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 SHMT1P34896 483 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 GABPAQ06546 454 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 TTF1Q15361 905 aaPredicted RBP16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 CERKLQ49MI3 558 aaPredicted RBP16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 USP6NLQ92738 828 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.23
PRKAR1A-220ENST00000592194 MAGEB6P1A0A0J9YX57 407 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 GOLIM4O00461 696 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 PDE6AP16499 860 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 EVX2Q03828 476 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 SLC9C2Q5TAH2 1124 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 ACER1Q8TDN7 264 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 TRIB2Q92519 343 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 PORCNQ9H237 461 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 PRO3102Q9H379 93 aa16.45■□□□□ 0.22
PRKAR1A-220ENST00000592194 CNMDO75829 334 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 MX1P20591 662 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 MNX1P50219 401 aaPredicted RBP16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 ERVK-24P63145 666 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 ABCB5Q2M3G0 1257 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 MAP3K21Q5TCX8 1036 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 CATSPERGQ6ZRH7 1159 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 HAUS7Q99871 368 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 NUDT12Q9BQG2 462 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 RBM27Q9P2N5 1060 aaKnown RBP16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
PRKAR1A-220ENST00000592194 RANBP2P49792 3224 aaKnown RBP16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 DDX60LQ5H9U9 1706 aaKnown RBP16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 MAPK4P31152 587 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 MORN1Q5T089 497 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 GTF3C2Q8WUA4 911 aaPredicted RBP16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 KIAA1683Q9H0B3 1180 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
PRKAR1A-220ENST00000592194 NAV1Q8NEY1 1877 aa16.42■□□□□ 0.22
PRKAR1A-220ENST00000592194 CD44P16070 742 aaKnown RBP16.42■□□□□ 0.22
PRKAR1A-220ENST00000592194 USP14P54578 494 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms