RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 SMCR8Q8TEV9 937 aaPredicted RBP19.59■□□□□ 0.73
DNMT1-221ENST00000589538 C12orf42Q96LP6 360 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 FAM227BQ96M60 508 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 MKNK2Q9HBH9 465 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 DIAPH3Q9NSV4 1193 aa19.59■□□□□ 0.73
DNMT1-221ENST00000589538 A0A0D9SFI3 127 aa19.58■□□□□ 0.72
DNMT1-221ENST00000589538 HOXA7P31268 230 aaPredicted RBP19.58■□□□□ 0.72
DNMT1-221ENST00000589538 NMIQ13287 307 aaPredicted RBP19.58■□□□□ 0.72
DNMT1-221ENST00000589538 ALX1Q15699 326 aa19.58■□□□□ 0.72
DNMT1-221ENST00000589538 TREML2Q5T2D2 321 aa19.58■□□□□ 0.72
DNMT1-221ENST00000589538 CD99L2Q8TCZ2 262 aa19.58■□□□□ 0.72
DNMT1-221ENST00000589538 SH2D4AQ9H788 454 aa19.58■□□□□ 0.72
DNMT1-221ENST00000589538 EFCC1Q9HA90 598 aa19.58■□□□□ 0.72
DNMT1-221ENST00000589538 CCDC171Q6TFL3 1326 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 GNRH1P01148 92 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 CYP2C8P10632 490 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 AKR1B1P15121 316 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 GCLCP48506 637 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-221ENST00000589538 IRX3P78415 501 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-221ENST00000589538 LACTBP83111 547 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-221ENST00000589538 PDE4BQ07343 736 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 FBXO46Q6PJ61 603 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-221ENST00000589538 CCDC129Q6ZRS4 1044 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 ABHD8Q96I13 439 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 ARHGEF10LQ9HCE6 1279 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 CPA4Q9UI42 421 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 TRIM17Q9Y577 477 aa19.57■□□□□ 0.72
DNMT1-221ENST00000589538 BCRP11274 1271 aa19.56■□□□□ 0.72
DNMT1-221ENST00000589538 ICA1Q05084 483 aa19.56■□□□□ 0.72
DNMT1-221ENST00000589538 OTOP1Q7RTM1 612 aa19.56■□□□□ 0.72
DNMT1-221ENST00000589538 GTF3C2Q8WUA4 911 aaPredicted RBP19.56■□□□□ 0.72
DNMT1-221ENST00000589538 KANSL2Q9H9L4 492 aa19.56■□□□□ 0.72
DNMT1-221ENST00000589538 EMILIN3Q9NT22 766 aa19.56■□□□□ 0.72
DNMT1-221ENST00000589538 ZMYM6O95789 1325 aa19.55■□□□□ 0.72
DNMT1-221ENST00000589538 PPARAQ07869 468 aa19.55■□□□□ 0.72
DNMT1-221ENST00000589538 ZNF444Q8N0Y2 327 aaPredicted RBP19.55■□□□□ 0.72
DNMT1-221ENST00000589538 ACER1Q8TDN7 264 aa19.55■□□□□ 0.72
DNMT1-221ENST00000589538 ASCC2Q9H1I8 757 aaPredicted RBP19.55■□□□□ 0.72
DNMT1-221ENST00000589538 SMIM22K7EJ46 135 aa19.54■□□□□ 0.72
DNMT1-221ENST00000589538 HSPD1P10809 573 aaKnown RBP19.54■□□□□ 0.72
DNMT1-221ENST00000589538 RASA1P20936 1047 aa19.54■□□□□ 0.72
DNMT1-221ENST00000589538 PRMT2P55345 433 aa19.54■□□□□ 0.72
DNMT1-221ENST00000589538 ZYXQ15942 572 aaKnown RBP19.54■□□□□ 0.72
DNMT1-221ENST00000589538 CWC27Q6UX04 472 aaKnown RBP19.54■□□□□ 0.72
DNMT1-221ENST00000589538 ANAPC4Q9UJX5 808 aa19.54■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L15C9J2P7 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L13C9JLJ4 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L11C9JVI0 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L18D6R9N7 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L22D6RA61 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L17D6RBQ6 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L19D6RCP7 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L20D6RJB6 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 FOXP2O15409 715 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 GSPT1P15170 499 aaKnown RBP19.53■□□□□ 0.72
DNMT1-221ENST00000589538 HOXD10P28358 340 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 USP17L24Q0WX57 530 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 FAM110CQ1W6H9 321 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 VPS53Q5VIR6 699 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 LPAR1Q92633 364 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 CCDC136Q96JN2 1154 aa19.53■□□□□ 0.72
DNMT1-221ENST00000589538 FCGRTP55899 365 aa19.52■□□□□ 0.72
DNMT1-221ENST00000589538 PPP4R3BQ5MIZ7 849 aa19.52■□□□□ 0.72
DNMT1-221ENST00000589538 ZNF589Q86UQ0 364 aaPredicted RBP19.52■□□□□ 0.72
DNMT1-221ENST00000589538 STK11IPQ8N1F8 1099 aa19.52■□□□□ 0.72
DNMT1-221ENST00000589538 RUFY2Q8WXA3 655 aa19.52■□□□□ 0.72
DNMT1-221ENST00000589538 TMX2Q9Y320 296 aa19.52■□□□□ 0.72
DNMT1-221ENST00000589538 GREB1LQ9C091 1923 aaPredicted RBP19.52■□□□□ 0.72
DNMT1-221ENST00000589538 RAD50Q92878 1312 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 A0A1W2PRG0 241 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 FGAP02671 866 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 VCAM1P19320 739 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 PSMC4P43686 418 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 HERVK_113P62684 666 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 ANKRD13CQ8N6S4 541 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 VCPKMTQ9H867 229 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 NYAP2Q9P242 653 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 PTPN22Q9Y2R2 807 aa19.51■□□□□ 0.71
DNMT1-221ENST00000589538 PLIN4Q96Q06 1357 aa19.5■□□□□ 0.71
DNMT1-221ENST00000589538 FMNL1O95466 1100 aaPredicted RBP19.5■□□□□ 0.71
DNMT1-221ENST00000589538 PCP11498 1178 aaKnown RBP19.5■□□□□ 0.71
DNMT1-221ENST00000589538 EEF2P13639 858 aaKnown RBP19.5■□□□□ 0.71
DNMT1-221ENST00000589538 CATSPERGQ6ZRH7 1159 aa19.5■□□□□ 0.71
DNMT1-221ENST00000589538 RPAP3Q9H6T3 665 aaPredicted RBP19.5■□□□□ 0.71
DNMT1-221ENST00000589538 GOPCQ9HD26 462 aa19.5■□□□□ 0.71
DNMT1-221ENST00000589538 SYNPO2Q9UMS6 1093 aa19.5■□□□□ 0.71
DNMT1-221ENST00000589538 HPS5Q9UPZ3 1129 aa19.5■□□□□ 0.71
DNMT1-221ENST00000589538 MGAMO43451 1857 aa19.5■□□□□ 0.71
DNMT1-221ENST00000589538 PRDM1O75626 825 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 TSPY3P0CV98 308 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 TSPY8P0CW00 308 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 ATP2B2Q01814 1243 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 ERICH6BQ5W0A0 696 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 SIAH1Q8IUQ4 282 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 NEDD1Q8NHV4 660 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 P2RX7Q99572 595 aaKnown RBP19.49■□□□□ 0.71
DNMT1-221ENST00000589538 DSCC1Q9BVC3 393 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.49■□□□□ 0.71
DNMT1-221ENST00000589538 ARHGAP39Q9C0H5 1083 aa19.49■□□□□ 0.71
DNMT1-221ENST00000589538 MORF4L1Q9UBU8 362 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms