RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 TDO2P48775 406 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 CDK8P49336 464 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 USP17L2Q6R6M4 530 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 C16orf86Q6ZW13 317 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 ANKRD13CQ8N6S4 541 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 EPB41L4AQ9HCS5 686 aaPredicted RBP17.36■□□□□ 0.37
CACTIN-206ENST00000588749 KIAA0100Q14667 2235 aaKnown RBP17.35■□□□□ 0.37
CACTIN-206ENST00000588749 MINDY4BA8MYZ0 360 aa17.35■□□□□ 0.37
CACTIN-206ENST00000588749 GNRH1P01148 92 aa17.35■□□□□ 0.37
CACTIN-206ENST00000588749 FCGRTP55899 365 aa17.35■□□□□ 0.37
CACTIN-206ENST00000588749 TMEM179Q6ZVK1 233 aa17.35■□□□□ 0.37
CACTIN-206ENST00000588749 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
CACTIN-206ENST00000588749 HOXA7P31268 230 aaPredicted RBP17.34■□□□□ 0.37
CACTIN-206ENST00000588749 GCLCP48506 637 aaPredicted RBP17.34■□□□□ 0.37
CACTIN-206ENST00000588749 USP14P54578 494 aa17.34■□□□□ 0.37
CACTIN-206ENST00000588749 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
CACTIN-206ENST00000588749 SBK1Q52WX2 424 aa17.34■□□□□ 0.37
CACTIN-206ENST00000588749 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
CACTIN-206ENST00000588749 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
CACTIN-206ENST00000588749 STK11IPQ8N1F8 1099 aa17.34■□□□□ 0.37
CACTIN-206ENST00000588749 C12orf42Q96LP6 360 aa17.34■□□□□ 0.37
CACTIN-206ENST00000588749 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 MYPNQ86TC9 1320 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 PATL2C9JE40 543 aaKnown RBP17.33■□□□□ 0.36
CACTIN-206ENST00000588749 HOXD10P28358 340 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 PRMT2P55345 433 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 IFNL3Q8IZI9 196 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 CCDC17Q96LX7 622 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 P2RX7Q99572 595 aaKnown RBP17.33■□□□□ 0.36
CACTIN-206ENST00000588749 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 SRRDQ9UH36 339 aa17.33■□□□□ 0.36
CACTIN-206ENST00000588749 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
CACTIN-206ENST00000588749 A0A1W2PRG0 241 aa17.32■□□□□ 0.36
CACTIN-206ENST00000588749 VCAM1P19320 739 aa17.32■□□□□ 0.36
CACTIN-206ENST00000588749 HERVK_113P62684 666 aa17.32■□□□□ 0.36
CACTIN-206ENST00000588749 ICA1Q05084 483 aa17.32■□□□□ 0.36
CACTIN-206ENST00000588749 RILPL2Q969X0 211 aa17.32■□□□□ 0.36
CACTIN-206ENST00000588749 ARMC5Q96C12 935 aa17.32■□□□□ 0.36
CACTIN-206ENST00000588749 TNPO2O14787 897 aaKnown RBP17.31■□□□□ 0.36
CACTIN-206ENST00000588749 RGS19P49795 217 aa17.31■□□□□ 0.36
CACTIN-206ENST00000588749 PRKCZQ05513 592 aa17.31■□□□□ 0.36
CACTIN-206ENST00000588749 RAET1EQ8TD07 263 aa17.31■□□□□ 0.36
CACTIN-206ENST00000588749 NAPBQ9H115 298 aa17.31■□□□□ 0.36
CACTIN-206ENST00000588749 OSBPL3Q9H4L5 887 aa17.31■□□□□ 0.36
CACTIN-206ENST00000588749 MKNK2Q9HBH9 465 aa17.31■□□□□ 0.36
CACTIN-206ENST00000588749 ARHGEF10LQ9HCE6 1279 aa17.31■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 PEX10O60683 326 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 SH3TC2Q8TF17 1288 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 MORF4L1Q9UBU8 362 aa17.3■□□□□ 0.36
CACTIN-206ENST00000588749 GREB1LQ9C091 1923 aaPredicted RBP17.29■□□□□ 0.36
CACTIN-206ENST00000588749 CENPFP49454 3210 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 FOXP2O15409 715 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 RASA1P20936 1047 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 ATP2B2Q01814 1243 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 NBPF11Q86T75 865 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 SIAH1Q8IUQ4 282 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 ZNF333Q96JL9 665 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 PAGR1Q9BTK6 254 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 RPAP3Q9H6T3 665 aaPredicted RBP17.29■□□□□ 0.36
CACTIN-206ENST00000588749 SH2D4AQ9H788 454 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 TXNRD2Q9NNW7 524 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 GABRQQ9UN88 632 aa17.29■□□□□ 0.36
CACTIN-206ENST00000588749 PRDM1O75626 825 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 MYCP01106 439 aaPredicted RBP17.28■□□□□ 0.36
CACTIN-206ENST00000588749 MLLT1Q03111 559 aaPredicted RBP17.28■□□□□ 0.36
CACTIN-206ENST00000588749 NMIQ13287 307 aaPredicted RBP17.28■□□□□ 0.36
CACTIN-206ENST00000588749 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 CATSPERGQ6ZRH7 1159 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 GPRC5AQ8NFJ5 357 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 GTF3C2Q8WUA4 911 aaPredicted RBP17.28■□□□□ 0.36
CACTIN-206ENST00000588749 COA7Q96BR5 231 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 KANSL2Q9H9L4 492 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 RBPJLQ9UBG7 517 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 TMX2Q9Y320 296 aa17.28■□□□□ 0.36
CACTIN-206ENST00000588749 EEF2P13639 858 aaKnown RBP17.27■□□□□ 0.36
CACTIN-206ENST00000588749 PDE4AP27815 886 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 FLT3LGP49771 235 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 PPARAQ07869 468 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 MCMDC2Q4G0Z9 681 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 KIAA1755Q5JYT7 1200 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 SPICE1Q8N0Z3 855 aa17.27■□□□□ 0.36
CACTIN-206ENST00000588749 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms