RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 LAMB1P07942 1786 aa16.45■□□□□ 0.22
NLE1-205ENST00000588642 IGKV6D-41A0A0C4DH26 115 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 ZBTB43O43298 467 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 CCT2P78371 535 aaKnown RBP16.44■□□□□ 0.22
NLE1-205ENST00000588642 ATP2B2Q01814 1243 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 CUL4AQ13619 759 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 DLK2Q6UY11 383 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 ZNF654Q8IZM8 581 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
NLE1-205ENST00000588642 PLIN4Q96Q06 1357 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 PHF20L1A8MW92 1017 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 POTEIP0CG38 1075 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 POTEJP0CG39 1038 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
NLE1-205ENST00000588642 CAP2P40123 477 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 JAG1P78504 1218 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 SEPT2Q15019 361 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
NLE1-205ENST00000588642 NUP133Q8WUM0 1156 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 MYL10Q9BUA6 226 aa16.43■□□□□ 0.22
NLE1-205ENST00000588642 GLIS2Q9BZE0 524 aaPredicted RBP16.43■□□□□ 0.22
NLE1-205ENST00000588642 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 TTLL1O95922 423 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 NF2P35240 595 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.22
NLE1-205ENST00000588642 PRKG1Q13976 671 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 MAP1SQ66K74 1059 aaPredicted RBP16.42■□□□□ 0.22
NLE1-205ENST00000588642 LDHDQ86WU2 507 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 MICU3Q86XE3 530 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 PNMA1Q8ND90 353 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 GTF3C6Q969F1 213 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 CDCA5Q96FF9 252 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 NCOA5Q9HCD5 579 aaKnown RBP16.42■□□□□ 0.22
NLE1-205ENST00000588642 HPS5Q9UPZ3 1129 aa16.42■□□□□ 0.22
NLE1-205ENST00000588642 DHX16O60231 1041 aaKnown RBP16.41■□□□□ 0.22
NLE1-205ENST00000588642 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
NLE1-205ENST00000588642 CTNND1O60716 968 aaKnown RBP16.41■□□□□ 0.22
NLE1-205ENST00000588642 CALM1P0DP23 149 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 CALM2P0DP24 149 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 CALM3P0DP25 149 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 RXRAP19793 462 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 ICA1Q05084 483 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 SCRN1Q12765 414 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 CCDC144CPQ8IYA2 1237 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 INTS4Q96HW7 963 aaKnown RBP16.41■□□□□ 0.22
NLE1-205ENST00000588642 NYAP2Q9P242 653 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 ZBTB21Q9ULJ3 1066 aa16.41■□□□□ 0.22
NLE1-205ENST00000588642 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.41■□□□□ 0.22
NLE1-205ENST00000588642 CPLX1O14810 134 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 DDAH1O94760 285 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 ASNSP08243 561 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
NLE1-205ENST00000588642 NOVP48745 357 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 RCAN1P53805 252 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 RTN1Q16799 776 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 FANCBQ8NB91 859 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 WRNIP1Q96S55 665 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 GINM1Q9NU53 330 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 SCN4AP35499 1836 aa16.4■□□□□ 0.22
NLE1-205ENST00000588642 UTRNP46939 3433 aa16.39■□□□□ 0.21
NLE1-205ENST00000588642 CCDC196A0A1B0GTZ2 297 aa16.39■□□□□ 0.21
NLE1-205ENST00000588642 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
NLE1-205ENST00000588642 INPP5BP32019 993 aa16.39■□□□□ 0.21
NLE1-205ENST00000588642 ST3GAL1Q11201 340 aa16.39■□□□□ 0.21
NLE1-205ENST00000588642 TROAPQ12815 778 aa16.39■□□□□ 0.21
NLE1-205ENST00000588642 TTLL12Q14166 644 aaPredicted RBP16.39■□□□□ 0.21
NLE1-205ENST00000588642 CPLX2Q6PUV4 134 aaKnown RBP16.39■□□□□ 0.21
NLE1-205ENST00000588642 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
NLE1-205ENST00000588642 KLRG1Q96E93 195 aa16.39■□□□□ 0.21
NLE1-205ENST00000588642 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
NLE1-205ENST00000588642 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
NLE1-205ENST00000588642 IREB2P48200 963 aaKnown RBP16.38■□□□□ 0.21
NLE1-205ENST00000588642 PPP2R5BQ15173 497 aa16.38■□□□□ 0.21
NLE1-205ENST00000588642 SIAH1Q8IUQ4 282 aa16.38■□□□□ 0.21
NLE1-205ENST00000588642 CTCFLQ8NI51 663 aaPredicted RBP16.38■□□□□ 0.21
NLE1-205ENST00000588642 ZKSCAN4Q969J2 545 aaPredicted RBP16.38■□□□□ 0.21
NLE1-205ENST00000588642 MKL1Q969V6 931 aa16.38■□□□□ 0.21
NLE1-205ENST00000588642 ARHGEF10LQ9HCE6 1279 aa16.38■□□□□ 0.21
NLE1-205ENST00000588642 CWC22Q9HCG8 908 aaKnown RBP16.38■□□□□ 0.21
NLE1-205ENST00000588642 PICK1Q9NRD5 415 aa16.38■□□□□ 0.21
NLE1-205ENST00000588642 SIPA1L1O43166 1804 aa16.38■□□□□ 0.21
NLE1-205ENST00000588642 TRAF5O00463 557 aa16.37■□□□□ 0.21
NLE1-205ENST00000588642 RAD21O60216 631 aa16.37■□□□□ 0.21
NLE1-205ENST00000588642 DTNBO60941 627 aa16.37■□□□□ 0.21
NLE1-205ENST00000588642 CDC27P30260 824 aa16.37■□□□□ 0.21
NLE1-205ENST00000588642 KIF5BP33176 963 aa16.37■□□□□ 0.21
NLE1-205ENST00000588642 MAP3K9P80192 1104 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms