RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ISY1Q9ULR0 285 aaKnown RBP10.8□□□□□ -0.68
SS18-220ENST00000582092 CEP350Q5VT06 3117 aa10.8□□□□□ -0.68
SS18-220ENST00000582092 CYP2D7A0A087X1C5 515 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 GPR75-ASB3A0A0A6YYF3 556 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 WNT10BO00744 389 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 DTNBO60941 627 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 LETM1O95202 739 aaPredicted RBP10.79□□□□□ -0.68
SS18-220ENST00000582092 EGFRP00533 1210 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 HSPA1AP0DMV8 641 aaKnown RBP10.79□□□□□ -0.68
SS18-220ENST00000582092 HSPA1BP0DMV9 641 aaKnown RBP10.79□□□□□ -0.68
SS18-220ENST00000582092 XBP1P17861 261 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 MAP2K2P36507 400 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 HUNKP57058 714 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 UBE2HP62256 183 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 FKBP1BP68106 108 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 DNM1Q05193 864 aaKnown RBP10.79□□□□□ -0.68
SS18-220ENST00000582092 GRM1Q13255 1194 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 SAFBQ15424 915 aaKnown RBP eCLIP10.79□□□□□ -0.68
SS18-220ENST00000582092 ATL3Q6DD88 541 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 SAPCD2Q86UD0 394 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 CCDC144CPQ8IYA2 1237 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 TEKT1Q969V4 418 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
SS18-220ENST00000582092 CAPNS2Q96L46 248 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 SPATA32Q96LK8 384 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 MXD3Q9BW11 206 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
SS18-220ENST00000582092 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
SS18-220ENST00000582092 ADM5C9JUS6 153 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 ORC4O43929 436 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 TSPY3P0CV98 308 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 TSPY8P0CW00 308 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 RCAN1P53805 252 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 FMR1Q06787 632 aaKnown RBP eCLIP10.78□□□□□ -0.68
SS18-220ENST00000582092 TNFAIP1Q13829 316 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 NBPF9Q3BBW0 867 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 TTC6Q86TZ1 520 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 MAPKAPK5Q8IW41 473 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 MTMR14Q8NCE2 650 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 CCDC102AQ96A19 550 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 CDCA5Q96FF9 252 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 ALG1Q9BT22 464 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 SLC26A6Q9BXS9 759 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 GDPD2Q9HCC8 539 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 RBM28Q9NW13 759 aaKnown RBP10.78□□□□□ -0.68
SS18-220ENST00000582092 SAP30BPQ9UHR5 308 aaKnown RBP10.78□□□□□ -0.68
SS18-220ENST00000582092 TNKSO95271 1327 aa10.78□□□□□ -0.68
SS18-220ENST00000582092 MAST2Q6P0Q8 1798 aa10.77□□□□□ -0.68
SS18-220ENST00000582092 PRDM1O75626 825 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 CTDNEP1O95476 244 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 RXRAP19793 462 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 KIF5BP33176 963 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 ADD1P35611 737 aaKnown RBP10.77□□□□□ -0.69
SS18-220ENST00000582092 GUCY1B3Q02153 619 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 NOGQ13253 232 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 TTLL12Q14166 644 aaPredicted RBP10.77□□□□□ -0.69
SS18-220ENST00000582092 SF3A1Q15459 793 aaKnown RBP10.77□□□□□ -0.69
SS18-220ENST00000582092 SLC4A8Q2Y0W8 1093 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 CFAP100Q494V2 611 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 CYP4F22Q6NT55 531 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 ZNF654Q8IZM8 581 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 FANCBQ8NB91 859 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 CTCFLQ8NI51 663 aaPredicted RBP10.77□□□□□ -0.69
SS18-220ENST00000582092 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 KAT14Q9H8E8 782 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 USP40Q9NVE5 1235 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
SS18-220ENST00000582092 SERPINA10Q9UK55 444 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 HPS5Q9UPZ3 1129 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 PPP2R3BQ9Y5P8 575 aa10.77□□□□□ -0.69
SS18-220ENST00000582092 PAPPA2Q9BXP8 1791 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 PPFIA3O75145 1194 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 DDAH1O94760 285 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 HLA-DOAP06340 250 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 CYP2D6P10635 497 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 TNNI2P48788 182 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 CTCFP49711 727 aaPredicted RBP10.76□□□□□ -0.69
SS18-220ENST00000582092 HDLBPQ00341 1268 aaKnown RBP10.76□□□□□ -0.69
SS18-220ENST00000582092 TFAP4Q01664 338 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 RGMBQ6NW40 437 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 ARMC9Q7Z3E5 817 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 BRAPQ7Z569 592 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 CERS5Q8N5B7 392 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 RGS22Q8NE09 1264 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 MYL10Q9BUA6 226 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 TMOD2Q9NZR1 351 aa10.76□□□□□ -0.69
SS18-220ENST00000582092 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 CA12O43570 354 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 FMNL1O95466 1100 aaPredicted RBP10.75□□□□□ -0.69
SS18-220ENST00000582092 FGRP09769 529 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 IFNAR1P17181 557 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 MRE11P49959 708 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 GNAQP50148 359 aa10.75□□□□□ -0.69
SS18-220ENST00000582092 ZNF157P51786 506 aaPredicted RBP10.75□□□□□ -0.69
SS18-220ENST00000582092 RESTQ13127 1097 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms