RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 TTLL12Q14166 644 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 WTAPQ15007 396 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SEPT2Q15019 361 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 LDLRAD1Q5T700 205 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 RCSD1Q6JBY9 416 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SGMS1Q86VZ5 419 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SIAH1Q8IUQ4 282 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SCYL3Q8IZE3 742 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ENAHQ8N8S7 591 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZKSCAN4Q969J2 545 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SNX21Q969T3 373 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CEP95Q96GE4 821 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 WRNIP1Q96S55 665 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 LY9Q9HBG7 655 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 GPHNQ9NQX3 736 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 NYAP2Q9P242 653 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZBTB21Q9ULJ3 1066 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 FZD1Q9UP38 647 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 RBM19Q9Y4C8 960 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TNKSO95271 1327 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 MYH8P13535 1937 aa10.76□□□□□ -0.69
CDK5RAP3-220ENST00000581160 USP17L5A8MUK1 530 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CELF2O95319 508 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TTLL1O95922 423 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TOP1P11387 765 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 FSTL1Q12841 308 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SHROOM1Q2M3G4 852 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 IFIT1BQ5T764 474 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CST9Q5W186 159 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 MOB2Q70IA6 237 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ANKRD13AQ8IZ07 590 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 C2orf69Q8N8R5 385 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 BRF1Q92994 677 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZNF274Q96GC6 653 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TMEM47Q9BQJ4 181 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZNF408Q9H9D4 720 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 LIMCH1Q9UPQ0 1083 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PASKQ96RG2 1323 aa10.75□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CCDC69A6NI79 296 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 UBE2Q2LH0YL09 131 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 EEF2P13639 858 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PTPRAP18433 802 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 APOBRQ0VD83 1088 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 WDR18Q9BV38 432 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PICK1Q9NRD5 415 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 BRPF3Q9ULD4 1205 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SYNPO2Q9UMS6 1093 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 STX8Q9UNK0 236 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CSADQ9Y600 493 aa10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 GREB1LQ9C091 1923 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CD2BP2O95400 341 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PDIA3P30101 505 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ICA1Q05084 483 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 VGLL4Q14135 290 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 NFXL1Q6ZNB6 911 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 LARP6Q9BRS8 491 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 AS3MTQ9HBK9 375 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TPCN1Q9ULQ1 816 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TMX2Q9Y320 296 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SLC12A7Q9Y666 1083 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SNCAIPQ9Y6H5 919 aa10.73□□□□□ -0.69
CDK5RAP3-220ENST00000581160 KLF18A0A0U1RQI7 1052 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 A0A1W2PRG0 241 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CALM1P0DP23 149 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CALM2P0DP24 149 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CALM3P0DP25 149 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 RCAN1P53805 252 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ATP2B2Q01814 1243 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PPATQ06203 517 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PPP2R5BQ15173 497 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CATIPQ7Z7H3 387 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ERO1BQ86YB8 467 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ACER1Q8TDN7 264 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SLC10A4Q96EP9 437 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 MAP3K14Q99558 947 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SH2D4AQ9H788 454 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 AFG3L2Q9Y4W6 797 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZHX2Q9Y6X8 837 aa10.72□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SPDYE5A6NIY4 337 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 C19orf81C9J6K1 198 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 USP17L10C9JJH3 530 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZBTB43O43298 467 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 PFKFB2O60825 505 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 DDAH1O94760 285 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ANP32AP39687 249 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ECE1P42892 770 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TROAPQ12815 778 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ME3Q16798 604 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms