RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 GNAT2P19087 354 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 GCLCP48506 637 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-219ENST00000580540 TDO2P48775 406 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 USP14P54578 494 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 MLLT1Q03111 559 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-219ENST00000580540 CHD1LQ86WJ1 897 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 RAET1EQ8TD07 263 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 EVI5LQ96CN4 794 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 P2RX7Q99572 595 aaKnown RBP19.92■□□□□ 0.78
SREBF1-219ENST00000580540 ARPP21Q9UBL0 812 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-219ENST00000580540 SRRDQ9UH36 339 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 MYPNQ86TC9 1320 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 LOC285556D6RIA3 1793 aa19.92■□□□□ 0.78
SREBF1-219ENST00000580540 HOXA7P31268 230 aaPredicted RBP19.91■□□□□ 0.78
SREBF1-219ENST00000580540 PRMT2P55345 433 aa19.91■□□□□ 0.78
SREBF1-219ENST00000580540 ZMYM1Q5SVZ6 1142 aa19.91■□□□□ 0.78
SREBF1-219ENST00000580540 TMEM179Q6ZVK1 233 aa19.91■□□□□ 0.78
SREBF1-219ENST00000580540 NBPF11Q86T75 865 aa19.91■□□□□ 0.78
SREBF1-219ENST00000580540 TRIM6-TRIM34B2RNG4 842 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 PATL2C9JE40 543 aaKnown RBP19.9■□□□□ 0.78
SREBF1-219ENST00000580540 TNPO2O14787 897 aaKnown RBP19.9■□□□□ 0.78
SREBF1-219ENST00000580540 RGS19P49795 217 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 NUCB1Q02818 461 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 FAM110CQ1W6H9 321 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 GIMAP6Q6P9H5 292 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 C16orf86Q6ZW13 317 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 SH3TC2Q8TF17 1288 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 KIAA1683Q9H0B3 1180 aa19.9■□□□□ 0.78
SREBF1-219ENST00000580540 PEX10O60683 326 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 HERVK_113P62684 666 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 ATP2B2Q01814 1243 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 PRKCZQ05513 592 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 SBK1Q52WX2 424 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 CCDC129Q6ZRS4 1044 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 CLEC10AQ8IUN9 316 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 RILPL2Q969X0 211 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 ARMC5Q96C12 935 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 CCDC17Q96LX7 622 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 NACAP1Q9BZK3 213 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 MKNK2Q9HBH9 465 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 EPB41L4AQ9HCS5 686 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-219ENST00000580540 TAOK2Q9UL54 1235 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 GABRQQ9UN88 632 aa19.89■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L15C9J2P7 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L13C9JLJ4 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L11C9JVI0 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L18D6R9N7 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L22D6RA61 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L17D6RBQ6 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L19D6RCP7 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L20D6RJB6 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 USP17L24Q0WX57 530 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 IFNL3Q8IZI9 196 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 C12orf42Q96LP6 360 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 PAGR1Q9BTK6 254 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 BIN2Q9UBW5 565 aaPredicted RBP19.88■□□□□ 0.77
SREBF1-219ENST00000580540 MYH8P13535 1937 aa19.88■□□□□ 0.77
SREBF1-219ENST00000580540 A0A1W2PRG0 241 aa19.87■□□□□ 0.77
SREBF1-219ENST00000580540 VCAM1P19320 739 aa19.87■□□□□ 0.77
SREBF1-219ENST00000580540 ICA1Q05084 483 aa19.87■□□□□ 0.77
SREBF1-219ENST00000580540 COA7Q96BR5 231 aa19.87■□□□□ 0.77
SREBF1-219ENST00000580540 ZNF333Q96JL9 665 aa19.87■□□□□ 0.77
SREBF1-219ENST00000580540 TMEM106CQ9BVX2 250 aa19.87■□□□□ 0.77
SREBF1-219ENST00000580540 RPAP3Q9H6T3 665 aaPredicted RBP19.87■□□□□ 0.77
SREBF1-219ENST00000580540 ARHGEF10LQ9HCE6 1279 aa19.87■□□□□ 0.77
SREBF1-219ENST00000580540 FLT3LGP49771 235 aa19.86■□□□□ 0.77
SREBF1-219ENST00000580540 PLEKHM2Q8IWE5 1019 aa19.86■□□□□ 0.77
SREBF1-219ENST00000580540 CCAR1Q8IX12 1150 aaKnown RBP19.86■□□□□ 0.77
SREBF1-219ENST00000580540 GPRC5AQ8NFJ5 357 aa19.86■□□□□ 0.77
SREBF1-219ENST00000580540 NAPBQ9H115 298 aa19.86■□□□□ 0.77
SREBF1-219ENST00000580540 MGAMO43451 1857 aa19.86■□□□□ 0.77
SREBF1-219ENST00000580540 POTEFA5A3E0 1075 aa19.85■□□□□ 0.77
SREBF1-219ENST00000580540 GRK4P32298 578 aa19.85■□□□□ 0.77
SREBF1-219ENST00000580540 CATSPERGQ6ZRH7 1159 aa19.85■□□□□ 0.77
SREBF1-219ENST00000580540 TXNRD2Q9NNW7 524 aa19.85■□□□□ 0.77
SREBF1-219ENST00000580540 RBPJLQ9UBG7 517 aa19.85■□□□□ 0.77
SREBF1-219ENST00000580540 RAD21O60216 631 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 PRDM1O75626 825 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 EEF2P13639 858 aaKnown RBP19.84■□□□□ 0.77
SREBF1-219ENST00000580540 SIAH1Q8IUQ4 282 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 ZNF444Q8N0Y2 327 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-219ENST00000580540 SPICE1Q8N0Z3 855 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 GTF3C2Q8WUA4 911 aaPredicted RBP19.84■□□□□ 0.77
SREBF1-219ENST00000580540 FAM227BQ96M60 508 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 TANGO6Q9C0B7 1094 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 SH2D4AQ9H788 454 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 KANSL2Q9H9L4 492 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 MORF4L1Q9UBU8 362 aa19.84■□□□□ 0.77
SREBF1-219ENST00000580540 ADCY3O60266 1144 aa19.83■□□□□ 0.77
SREBF1-219ENST00000580540 RASA1P20936 1047 aa19.83■□□□□ 0.77
SREBF1-219ENST00000580540 SAMD1Q6SPF0 538 aaPredicted RBP19.83■□□□□ 0.77
SREBF1-219ENST00000580540 ZNF287Q9HBT7 754 aa19.83■□□□□ 0.77
SREBF1-219ENST00000580540 CWC22Q9HCG8 908 aaKnown RBP19.83■□□□□ 0.77
SREBF1-219ENST00000580540 HELLSQ9NRZ9 838 aa19.83■□□□□ 0.77
SREBF1-219ENST00000580540 HTTP42858 3142 aa19.83■□□□□ 0.76
SREBF1-219ENST00000580540 SLC3A2P08195 630 aaKnown RBP19.82■□□□□ 0.76
SREBF1-219ENST00000580540 ELNP15502 786 aa19.82■□□□□ 0.76
SREBF1-219ENST00000580540 ERVK-9P63128 1117 aa19.82■□□□□ 0.76
SREBF1-219ENST00000580540 ERVK-24P63145 666 aa19.82■□□□□ 0.76
SREBF1-219ENST00000580540 NMIQ13287 307 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms