RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 MCMDC2Q4G0Z9 681 aa22.31■■□□□ 1.16
PPP4R1-215ENST00000580182 ZNF589Q86UQ0 364 aaPredicted RBP22.31■■□□□ 1.16
PPP4R1-215ENST00000580182 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
PPP4R1-215ENST00000580182 ROBO3Q96MS0 1386 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 A0A1W2PRG0 241 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 BCRP11274 1271 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 TTC22Q5TAA0 569 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 USP17L2Q6R6M4 530 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 TMEM179Q6ZVK1 233 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 FEZ1Q99689 392 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 NACAP1Q9BZK3 213 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 NAPBQ9H115 298 aa22.3■■□□□ 1.16
PPP4R1-215ENST00000580182 CTGFP29279 349 aa22.29■■□□□ 1.16
PPP4R1-215ENST00000580182 LACTBP83111 547 aaPredicted RBP22.29■■□□□ 1.16
PPP4R1-215ENST00000580182 TICAM2Q86XR7 235 aa22.29■■□□□ 1.16
PPP4R1-215ENST00000580182 SIAH1Q8IUQ4 282 aa22.29■■□□□ 1.16
PPP4R1-215ENST00000580182 SMCR8Q8TEV9 937 aaPredicted RBP22.29■■□□□ 1.16
PPP4R1-215ENST00000580182 ASCC2Q9H1I8 757 aaPredicted RBP22.29■■□□□ 1.16
PPP4R1-215ENST00000580182 EFCC1Q9HA90 598 aa22.29■■□□□ 1.16
PPP4R1-215ENST00000580182 PRDM1O75626 825 aa22.28■■□□□ 1.16
PPP4R1-215ENST00000580182 RASA1P20936 1047 aa22.28■■□□□ 1.16
PPP4R1-215ENST00000580182 CCDC17Q96LX7 622 aa22.28■■□□□ 1.16
PPP4R1-215ENST00000580182 KIAA1683Q9H0B3 1180 aa22.28■■□□□ 1.16
PPP4R1-215ENST00000580182 MKNK2Q9HBH9 465 aa22.28■■□□□ 1.16
PPP4R1-215ENST00000580182 PNMA3Q9UL41 463 aa22.28■■□□□ 1.16
PPP4R1-215ENST00000580182 OSBPP22059 807 aa22.27■■□□□ 1.16
PPP4R1-215ENST00000580182 PABPC4Q13310 644 aaKnown RBP eCLIP22.27■■□□□ 1.16
PPP4R1-215ENST00000580182 PKN2Q16513 984 aaKnown RBP22.27■■□□□ 1.16
PPP4R1-215ENST00000580182 CWC27Q6UX04 472 aaKnown RBP22.27■■□□□ 1.16
PPP4R1-215ENST00000580182 SKAP1Q86WV1 359 aa22.27■■□□□ 1.16
PPP4R1-215ENST00000580182 C12orf42Q96LP6 360 aa22.27■■□□□ 1.16
PPP4R1-215ENST00000580182 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.27■■□□□ 1.16
PPP4R1-215ENST00000580182 HOXA7P31268 230 aaPredicted RBP22.26■■□□□ 1.15
PPP4R1-215ENST00000580182 PPARAQ07869 468 aa22.26■■□□□ 1.15
PPP4R1-215ENST00000580182 FBXO46Q6PJ61 603 aaPredicted RBP22.26■■□□□ 1.15
PPP4R1-215ENST00000580182 ANKRD13CQ8N6S4 541 aa22.26■■□□□ 1.15
PPP4R1-215ENST00000580182 HPS5Q9UPZ3 1129 aa22.26■■□□□ 1.15
PPP4R1-215ENST00000580182 CCDC171Q6TFL3 1326 aa22.26■■□□□ 1.15
PPP4R1-215ENST00000580182 CCDC85CA6NKD9 419 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 PEX10O60683 326 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 HSPD1P10809 573 aaKnown RBP22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 USP14P54578 494 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 ICA1Q05084 483 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 CTDSPL2Q05D32 466 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 KIF22Q14807 665 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 KIAA1755Q5JYT7 1200 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 P2RX7Q99572 595 aaKnown RBP22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 INCENPQ9NQS7 918 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 DIAPH3Q9NSV4 1193 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 PTPN22Q9Y2R2 807 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 TACC3Q9Y6A5 838 aa22.25■■□□□ 1.15
PPP4R1-215ENST00000580182 VCAM1P19320 739 aa22.24■■□□□ 1.15
PPP4R1-215ENST00000580182 PSMC4P43686 418 aa22.24■■□□□ 1.15
PPP4R1-215ENST00000580182 IRX3P78415 501 aaPredicted RBP22.24■■□□□ 1.15
PPP4R1-215ENST00000580182 TRIM47Q96LD4 638 aa22.24■■□□□ 1.15
PPP4R1-215ENST00000580182 FGAP02671 866 aa22.23■■□□□ 1.15
PPP4R1-215ENST00000580182 EEF2P13639 858 aaKnown RBP22.23■■□□□ 1.15
PPP4R1-215ENST00000580182 ATP2B2Q01814 1243 aa22.23■■□□□ 1.15
PPP4R1-215ENST00000580182 ALX1Q15699 326 aa22.23■■□□□ 1.15
PPP4R1-215ENST00000580182 CENPQQ7L2Z9 268 aaPredicted RBP22.23■■□□□ 1.15
PPP4R1-215ENST00000580182 IL25Q9H293 177 aa22.23■■□□□ 1.15
PPP4R1-215ENST00000580182 GREB1LQ9C091 1923 aaPredicted RBP22.23■■□□□ 1.15
PPP4R1-215ENST00000580182 FMNL1O95466 1100 aaPredicted RBP22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 HERVK_113P62684 666 aa22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 POTEEQ6S8J3 1075 aa22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 ZNF444Q8N0Y2 327 aaPredicted RBP22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 RPAP3Q9H6T3 665 aaPredicted RBP22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 KANSL2Q9H9L4 492 aa22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 ARHGEF10LQ9HCE6 1279 aa22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 TMX2Q9Y320 296 aa22.22■■□□□ 1.15
PPP4R1-215ENST00000580182 HTTP42858 3142 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L15C9J2P7 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L13C9JLJ4 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L11C9JVI0 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L18D6R9N7 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L22D6RA61 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L17D6RBQ6 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L19D6RCP7 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L20D6RJB6 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 HIP1O00291 1037 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 GCLCP48506 637 aaPredicted RBP22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 PDE4BQ07343 736 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 USP17L24Q0WX57 530 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 ARHGEF6Q15052 776 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 FAM47AQ5JRC9 791 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 CATSPERGQ6ZRH7 1159 aa22.21■■□□□ 1.15
PPP4R1-215ENST00000580182 IGKV6D-41A0A0C4DH26 115 aa22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 SLC3A2P08195 630 aaKnown RBP22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 FAM110CQ1W6H9 321 aa22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 SPICE1Q8N0Z3 855 aa22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 ZNF287Q9HBT7 754 aa22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 TXNRD2Q9NNW7 524 aa22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 ANAPC4Q9UJX5 808 aa22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 PTCH2Q9Y6C5 1203 aa22.2■■□□□ 1.14
PPP4R1-215ENST00000580182 MFAP1P55081 439 aaKnown RBP22.19■■□□□ 1.14
PPP4R1-215ENST00000580182 FCGRTP55899 365 aa22.19■■□□□ 1.14
PPP4R1-215ENST00000580182 VCPKMTQ9H867 229 aa22.19■■□□□ 1.14
PPP4R1-215ENST00000580182 RBPJLQ9UBG7 517 aa22.19■■□□□ 1.14
PPP4R1-215ENST00000580182 MGAMO43451 1857 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms