RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MED26O95402 600 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 TGFB1P01137 390 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 NEFMP07197 916 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 NME1P15531 152 aaKnown RBP3.89□□□□□ -1.79
COPS3-213ENST00000577210 GUCY2CP25092 1073 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 NTF4P34130 210 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 CLCQ05315 142 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 SLBPQ14493 270 aaKnown RBP eCLIP3.89□□□□□ -1.79
COPS3-213ENST00000577210 FXNQ16595 210 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 CDPF1Q6NVV7 123 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 ARMCX6Q7L4S7 300 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 TBC1D32Q96NH3 1257 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 DBNDD2Q9BQY9 259 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 TRIM55Q9BYV6 548 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 PHAXQ9H814 394 aaKnown RBP3.89□□□□□ -1.79
COPS3-213ENST00000577210 MKNK2Q9HBH9 465 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 PRDM10Q9NQV6 1147 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 PCMTD2Q9NV79 361 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 TJP2Q9UDY2 1190 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 KLHL3Q9UH77 587 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 KCNH3Q9ULD8 1083 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 MAPK8IP1Q9UQF2 711 aa3.89□□□□□ -1.79
COPS3-213ENST00000577210 IGF2BP3O00425 579 aaKnown RBP eCLIP3.88□□□□□ -1.79
COPS3-213ENST00000577210 GTF2F1P35269 517 aaKnown RBP eCLIP3.88□□□□□ -1.79
COPS3-213ENST00000577210 GRIK1P39086 918 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 KIR3DL1P43629 444 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 CD97P48960 835 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 RBL2Q08999 1139 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 NFIAQ12857 509 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 NCAPHQ15003 741 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 PRAMEF13Q5VWM6 474 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 OVOS1Q6IE37 1185 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 LETMD1Q6P1Q0 360 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 OGFOD3Q6PK18 319 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 SEZ6L2Q6UXD5 910 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 ARHGAP27Q6ZUM4 889 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 LRP10Q7Z4F1 713 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 ZAR1Q86SH2 424 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 ACSF2Q96CM8 615 aaPredicted RBP3.88□□□□□ -1.79
COPS3-213ENST00000577210 ANAPC16Q96DE5 110 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 ATG4CQ96DT6 458 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 SHDQ96IW2 340 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 ASPNQ9BXN1 380 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 C7orf69Q9H7B7 122 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 PRDM5Q9NQX1 630 aaPredicted RBP3.88□□□□□ -1.79
COPS3-213ENST00000577210 ACTR10Q9NZ32 417 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 PPT2Q9UMR5 302 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 CEP131Q9UPN4 1083 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 CORINQ9Y5Q5 1042 aa3.88□□□□□ -1.79
COPS3-213ENST00000577210 GNAT3A8MTJ3 354 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 CLEC3AO75596 197 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 IGLV1-40P01703 118 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 CDK8P49336 464 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 NFE2L2Q16236 605 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 ARSHQ5FYA8 562 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 INTS5Q6P9B9 1019 aaKnown RBP3.87□□□□□ -1.79
COPS3-213ENST00000577210 C22orf34Q6ZV56 151 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 LSRQ86X29 649 aaPredicted RBP3.87□□□□□ -1.79
COPS3-213ENST00000577210 PIWIL2Q8TC59 973 aaKnown RBP3.87□□□□□ -1.79
COPS3-213ENST00000577210 RNF141Q8WVD5 230 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 MIPEPQ99797 713 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 OSBPL1AQ9BXW6 950 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 ASCC2Q9H1I8 757 aaPredicted RBP3.87□□□□□ -1.79
COPS3-213ENST00000577210 SIRPGQ9P1W8 387 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 USP35Q9P2H5 1018 aa3.87□□□□□ -1.79
COPS3-213ENST00000577210 TPX2Q9ULW0 747 aaKnown RBP3.87□□□□□ -1.79
COPS3-213ENST00000577210 HMX2A2RU54 273 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 FAM87AP0C7U9 286 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 ZNF143P52747 638 aaPredicted RBP3.86□□□□□ -1.79
COPS3-213ENST00000577210 PPP2R5EQ16537 467 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 SFRP5Q5T4F7 317 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 MCTP1Q6DN14 999 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 CCDC81Q6ZN84 652 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 ZDHHC13Q8IUH4 622 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 MKL1Q969V6 931 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 FBXL18Q96ME1 805 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 DUSP23Q9BVJ7 150 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 EPN3Q9H201 632 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 ZNF408Q9H9D4 720 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 FBRSQ9HAH7 460 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 C1GALT1Q9NS00 363 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 PRR13Q9NZ81 148 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 LEMD3Q9Y2U8 911 aa3.86□□□□□ -1.79
COPS3-213ENST00000577210 KIAA1324LA8MWY0 1029 aaPredicted RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 CHURC1-FNTBB4DL54 471 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 SMAD7O15105 426 aaKnown RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 ADAMTS4O75173 837 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 ENDOUP21128 410 aaKnown RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 PMS1P54277 932 aaKnown RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 SLC7A5Q01650 507 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 RAB33AQ14088 237 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 TCEAL1Q15170 157 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 NKG7Q16617 165 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 ANKS3Q6ZW76 656 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 TTC6Q86TZ1 520 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 CRACR2BQ8N4Y2 399 aaPredicted RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 TOP6BLQ8N6T0 577 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 ENOX1Q8TC92 643 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms