RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 ZCCHC17Q9NP64 241 aaKnown RBP12.76□□□□□ -0.37
ABR-235ENST00000576964 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
ABR-235ENST00000576964 SMIM22K7EJ46 135 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 IGF2BP3O00425 579 aaKnown RBP eCLIP12.75□□□□□ -0.37
ABR-235ENST00000576964 LAMB1P07942 1786 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 RASA1P20936 1047 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 NT5C2P49902 561 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 HMGCS2P54868 508 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 BACE1P56817 501 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 TRDNQ13061 729 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
ABR-235ENST00000576964 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
ABR-235ENST00000576964 AKNAD1Q5T1N1 836 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 PROCA1Q8NCQ7 364 aaPredicted RBP12.75□□□□□ -0.37
ABR-235ENST00000576964 ESR2Q92731 530 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 PARK7Q99497 189 aaKnown RBP12.75□□□□□ -0.37
ABR-235ENST00000576964 CNNM2Q9H8M5 875 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 ZFYVE28Q9HCC9 887 aa12.75□□□□□ -0.37
ABR-235ENST00000576964 BTBD19C9JJ37 291 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 PDHXO00330 501 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
ABR-235ENST00000576964 JAG1P78504 1218 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 TFAP4Q01664 338 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 SHROOM1Q2M3G4 852 aaPredicted RBP12.74□□□□□ -0.37
ABR-235ENST00000576964 SH3D19Q5HYK7 790 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 STAG1Q8WVM7 1258 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 KIAA1683Q9H0B3 1180 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 IL25Q9H293 177 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 AGTPBP1Q9UPW5 1226 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 ATAD5Q96QE3 1844 aa12.74□□□□□ -0.37
ABR-235ENST00000576964 FOXN1O15353 648 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 ORC4O43929 436 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 RAD21O60216 631 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 REC8O95072 547 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 OSBPP22059 807 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 IRX3P78415 501 aaPredicted RBP12.73□□□□□ -0.37
ABR-235ENST00000576964 FAM47AQ5JRC9 791 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 RALYLQ86SE5 291 aaKnown RBP12.73□□□□□ -0.37
ABR-235ENST00000576964 FAM43AQ8N2R8 423 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 SMCR8Q8TEV9 937 aaPredicted RBP12.73□□□□□ -0.37
ABR-235ENST00000576964 PTPN18Q99952 460 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 KRT23Q9C075 422 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
ABR-235ENST00000576964 MYH8P13535 1937 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 TTLL1O95922 423 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 EEF2P13639 858 aaKnown RBP12.72□□□□□ -0.37
ABR-235ENST00000576964 GUCY1A2P33402 732 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 PTH1RQ03431 593 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 IQCA1Q86XH1 822 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 NEDD1Q8NHV4 660 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 ACER1Q8TDN7 264 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 LPAR1Q92633 364 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 STX8Q9UNK0 236 aa12.72□□□□□ -0.37
ABR-235ENST00000576964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
ABR-235ENST00000576964 RBM8AQ9Y5S9 174 aaKnown RBP12.72□□□□□ -0.37
ABR-235ENST00000576964 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 FGRP09769 529 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 LBX1P52954 281 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 CRHR2Q13324 411 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 TBC1D10CQ8IV04 446 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 CEP95Q96GE4 821 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 C12orf42Q96LP6 360 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 CFHR5Q9BXR6 569 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 NYAP2Q9P242 653 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 ISY1Q9ULR0 285 aaKnown RBP12.71□□□□□ -0.37
ABR-235ENST00000576964 TMX2Q9Y320 296 aa12.71□□□□□ -0.37
ABR-235ENST00000576964 USP17L15C9J2P7 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L13C9JLJ4 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L11C9JVI0 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L18D6R9N7 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L22D6RA61 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L17D6RBQ6 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L19D6RCP7 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L20D6RJB6 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
ABR-235ENST00000576964 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
ABR-235ENST00000576964 USP17L24Q0WX57 530 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 MOGSQ13724 837 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 ARHGEF6Q15052 776 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 TREML2Q5T2D2 321 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 GPAT2Q6NUI2 795 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 CLEC10AQ8IUN9 316 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 UBAC1Q9BSL1 405 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 LSG1Q9H089 658 aaKnown RBP12.7□□□□□ -0.38
ABR-235ENST00000576964 VCPKMTQ9H867 229 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 INCENPQ9NQS7 918 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 EMILIN3Q9NT22 766 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 MTMR4Q9NYA4 1195 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 SYNPO2Q9UMS6 1093 aa12.7□□□□□ -0.38
ABR-235ENST00000576964 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms