RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 MAST3O60307 1309 aa11.52□□□□□ -0.57
NPLOC4-219ENST00000576713 GPR75-ASB3A0A0A6YYF3 556 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 TCRBV5S4A2TA0A5A2 114 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 WDHD1O75717 1129 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 S1PR4O95977 384 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 SPTY2D1Q68D10 685 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 CHD1LQ86WJ1 897 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 APOBEC3FQ8IUX4 373 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 USP40Q9NVE5 1235 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 PAG1Q9NWQ8 432 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 PAPPA2Q9BXP8 1791 aa11.51□□□□□ -0.57
NPLOC4-219ENST00000576713 RASSF10A6NK89 507 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 F12P00748 615 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 MX1P20591 662 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 PRKG1Q13976 671 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 NAA16Q6N069 864 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 SH3BP5LQ7L8J4 393 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 MAGEB6Q8N7X4 407 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 MIGA1Q8NAN2 632 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 EPS8L1Q8TE68 723 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 SH3RF3Q8TEJ3 882 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 AATFQ9NY61 560 aaKnown RBP eCLIP11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 MKRN1Q9UHC7 482 aaKnown RBP11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 TLL2Q9Y6L7 1015 aa11.5□□□□□ -0.57
NPLOC4-219ENST00000576713 MYO1BO43795 1136 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 CCNYL3P0C7X3 344 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 PDE6AP16499 860 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 CYP7A1P22680 504 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 PDE1AP54750 535 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 TCP10Q12799 353 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 NR6A1Q15406 480 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 EVA1BQ9NVM1 165 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 STAP2Q9UGK3 403 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 ATRNL1Q5VV63 1379 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 THSD7BQ9C0I4 1608 aa11.49□□□□□ -0.57
NPLOC4-219ENST00000576713 A6NJR5 290 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 UBE2Q2LH0YL09 131 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 RAD21O60216 631 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 RGS3P49796 1198 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 SLC9C2Q5TAH2 1124 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 RIOK1Q9BRS2 568 aaKnown RBP11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 IDI2Q9BXS1 227 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 GBA2Q9HCG7 927 aaPredicted RBP11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 TTC41PQ6P2S7 1318 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 ZNF532Q9HCE3 1301 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
NPLOC4-219ENST00000576713 OTOFQ9HC10 1997 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 SIPA1L1O43166 1804 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 DDTLA6NHG4 134 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 ADD2P35612 726 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 VEGFBP49765 207 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 GSTO1P78417 241 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 PICALMQ13492 652 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 FKBP1CQ5VVH2 108 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 CYP4F22Q6NT55 531 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 GDPD2Q9HCC8 539 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 ABT1Q9ULW3 272 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-219ENST00000576713 DDX60LQ5H9U9 1706 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 FAM155AB1AL88 458 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 USP2O75604 605 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 HUNKP57058 714 aa11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 MAP3K12Q12852 859 aa11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 TTF1Q15361 905 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 KBTBD3Q8NAB2 608 aa11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 FAM151AQ8WW52 585 aa11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 CLMNQ96JQ2 1002 aa11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 PUS7LQ9H0K6 701 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.57
NPLOC4-219ENST00000576713 FOCADQ5VW36 1801 aa11.46□□□□□ -0.58
NPLOC4-219ENST00000576713 RPAP1Q9BWH6 1393 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 FLT1P17948 1338 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 SMIM22K7EJ46 135 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 PRKAB2O43741 272 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 AOC2O75106 756 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 GLRX3O76003 335 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 LDHCP07864 332 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 HSPA1AP0DMV8 641 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 HSPA1BP0DMV9 641 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 CTHP32929 405 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 SLC4A8Q2Y0W8 1093 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 MIGA2Q7L4E1 593 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 MAPKAPK5Q8IW41 473 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 SEC62Q99442 399 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 ARMT1Q9H993 441 aa11.45□□□□□ -0.58
NPLOC4-219ENST00000576713 WDR33Q9C0J8 1336 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-219ENST00000576713 FAM196BA6NMK8 535 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms