RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TGFB2P61812 414 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 ZFPM1Q8IX07 1006 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 OSBPL5Q9H0X9 879 aaPredicted RBP8.18□□□□□ -1.1
SMG1-215ENST00000568239 TDRD3Q9H7E2 651 aaKnown RBP8.18□□□□□ -1.1
SMG1-215ENST00000568239 BCS1LQ9Y276 419 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 ELP1O95163 1332 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 PSMD14O00487 310 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 XBP1P17861 261 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 STK38Q15208 465 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 CFAP100Q494V2 611 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 GRIPAP1Q4V328 841 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 MYSM1Q5VVJ2 828 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 BRAPQ7Z569 592 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 NIM1KQ8IY84 436 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 RNF26Q9BY78 433 aaPredicted RBP8.18□□□□□ -1.1
SMG1-215ENST00000568239 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 GRPEL1Q9HAV7 217 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 VPS54Q9P1Q0 977 aa8.18□□□□□ -1.1
SMG1-215ENST00000568239 FAM196BA6NMK8 535 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 BTBD18B2RXH4 712 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 GOLGA8HP0CJ92 632 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 ATP2B1P20020 1258 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 KIF5BP33176 963 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 CCDC178Q5BJE1 867 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 DIS3L2Q8IYB7 885 aaKnown RBP8.17□□□□□ -1.1
SMG1-215ENST00000568239 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 SRBD1Q8N5C6 995 aaKnown RBP8.17□□□□□ -1.1
SMG1-215ENST00000568239 CEP95Q96GE4 821 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 PGBD1Q96JS3 809 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 PSMD1Q99460 953 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 TMEM47Q9BQJ4 181 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 CLIC4Q9Y696 253 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 FSD2A1L4K1 749 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 RAD21O60216 631 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 LIG1P18858 919 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 MRE11P49959 708 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 ZNF445P59923 1031 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 FKBP1AP62942 108 aaKnown RBP8.17□□□□□ -1.1
SMG1-215ENST00000568239 CAMK4Q16566 473 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 CCDC183Q5T5S1 534 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 SOGA3Q5TF21 947 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 TMTC3Q6ZXV5 915 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 NEDD1Q8NHV4 660 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 PRMT6Q96LA8 375 aaPredicted RBP8.17□□□□□ -1.1
SMG1-215ENST00000568239 SERPINA10Q9UK55 444 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 NID2Q14112 1375 aa8.17□□□□□ -1.1
SMG1-215ENST00000568239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 CLRN2A0PK11 232 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 MMP1P03956 469 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 XRCC6P12956 609 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMG1-215ENST00000568239 AKR1B1P15121 316 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 RSBN1LQ6PCB5 846 aaPredicted RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 RASGRP2Q7LDG7 609 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 CLEC10AQ8IUN9 316 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 TAOK3Q9H2K8 898 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 DACT1Q9NYF0 836 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 ISY1Q9ULR0 285 aaKnown RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 DDTLA6NHG4 134 aaPredicted RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 PRPF3O43395 683 aaKnown RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 HDLBPQ00341 1268 aaKnown RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 NR5A1Q13285 461 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 ATL3Q6DD88 541 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 SNED1Q8TER0 1413 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMG1-215ENST00000568239 PANK2Q9BZ23 570 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 TCP11L1Q9NUJ3 509 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 RCOR1Q9UKL0 485 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 HDAC9Q9UKV0 1011 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 DDX60LQ5H9U9 1706 aaKnown RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 TCP10L2B9ZVM9 353 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 MARCKSP29966 332 aaPredicted RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 NT5C2P49902 561 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 PKN1Q16512 942 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 LRSAM1Q6UWE0 723 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 LRRC47Q8N1G4 583 aaKnown RBP8.16□□□□□ -1.1
SMG1-215ENST00000568239 RNF214Q8ND24 703 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 MRIQ9BWK5 157 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 CPVLQ9H3G5 476 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 TMOD2Q9NZR1 351 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 ZNRF3Q9ULT6 936 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 MYH8P13535 1937 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 MYH15Q9Y2K3 1946 aa8.16□□□□□ -1.1
SMG1-215ENST00000568239 CNTNAP5Q8WYK1 1306 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 ECM29Q5VYK3 1845 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 DLEC1Q9Y238 1755 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 SPTLC2O15270 562 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 NR1I2O75469 434 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 GABPAQ06546 454 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 FUT2Q10981 343 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 DLGAP5Q15398 846 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 ANO1Q5XXA6 986 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 USP17L2Q6R6M4 530 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 NOSTRINQ8IVI9 506 aa8.15□□□□□ -1.1
SMG1-215ENST00000568239 CCAR1Q8IX12 1150 aaKnown RBP8.15□□□□□ -1.1
SMG1-215ENST00000568239 UPF1Q92900 1129 aaKnown RBP eCLIP8.15□□□□□ -1.1
SMG1-215ENST00000568239 VEZTQ9HBM0 779 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms