RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 FAM43BQ6ZT52 329 aaPredicted RBP6.21□□□□□ -1.41
LINC01541-202ENST00000568095 TOGARAM2Q6ZUX3 1019 aa6.21□□□□□ -1.41
LINC01541-202ENST00000568095 STOX1Q6ZVD7 989 aa6.21□□□□□ -1.41
LINC01541-202ENST00000568095 TADA2BQ86TJ2 420 aa6.21□□□□□ -1.41
LINC01541-202ENST00000568095 CEP112Q8N8E3 955 aa6.21□□□□□ -1.41
LINC01541-202ENST00000568095 VGLL2Q8N8G2 317 aa6.21□□□□□ -1.41
LINC01541-202ENST00000568095 ZNF274Q96GC6 653 aaPredicted RBP6.21□□□□□ -1.41
LINC01541-202ENST00000568095 BAG1Q99933 345 aaPredicted RBP6.21□□□□□ -1.41
LINC01541-202ENST00000568095 SDF4Q9BRK5 362 aa6.21□□□□□ -1.41
LINC01541-202ENST00000568095 ABCC12Q96J65 1359 aa6.21□□□□□ -1.41
LINC01541-202ENST00000568095 ATXN2Q99700 1313 aaKnown RBP6.21□□□□□ -1.42
LINC01541-202ENST00000568095 TMEM232C9JQI7 657 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 CLGNO14967 610 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 PLSCR1O15162 318 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 ZNF18P17022 549 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 FXR2P51116 673 aaKnown RBP eCLIP6.21□□□□□ -1.42
LINC01541-202ENST00000568095 CCDC91Q7Z6B0 441 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 AACSQ86V21 672 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 SYNE4Q8N205 404 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 CHMP4CQ96CF2 233 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 ABCB6Q9NP58 842 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 A1CFQ9NQ94 594 aaKnown RBP6.21□□□□□ -1.42
LINC01541-202ENST00000568095 DONSONQ9NYP3 566 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 CDC23Q9UJX2 597 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 HDAC5Q9UQL6 1122 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 SYF2O95926 243 aaKnown RBP6.21□□□□□ -1.42
LINC01541-202ENST00000568095 LMOD1P29536 600 aaPredicted RBP6.21□□□□□ -1.42
LINC01541-202ENST00000568095 CASP8Q14790 479 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 SH3D19Q5HYK7 790 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 DHX32Q7L7V1 743 aaKnown RBP6.21□□□□□ -1.42
LINC01541-202ENST00000568095 FAM107BQ9H098 131 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 NARFQ9UHQ1 456 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 CLIC4Q9Y696 253 aa6.21□□□□□ -1.42
LINC01541-202ENST00000568095 CACNA1SQ13698 1873 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 KIF1CO43896 1103 aaKnown RBP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 ERLIN1O75477 346 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 CCDC172P0C7W6 258 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 TOP1P11387 765 aaKnown RBP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 KCNQ4P56696 695 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 CT47A1Q5JQC4 288 aaPredicted RBP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 SUSD4Q5VX71 490 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 CNNM3Q8NE01 707 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 DRC1Q96MC2 740 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 PANX2Q96RD6 677 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 DEF6Q9H4E7 631 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 MRPL44Q9H9J2 332 aaKnown RBP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 PRDM16Q9HAZ2 1276 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 GPR108Q9NPR9 543 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 CEP83Q9Y592 693 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 MROH7-TTC4A0A0A0MT08 1334 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 SH3TC1Q8TE82 1336 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 SPTLC2O15270 562 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 PFKFB1P16118 471 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 ATP5JP18859 108 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 CTSWP56202 376 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 NT5DC1Q5TFE4 455 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 SND1Q7KZF4 910 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 BRAPQ7Z569 592 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 TTLL11Q8NHH1 800 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 TACO1Q9BSH4 297 aaKnown RBP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 GBP3Q9H0R5 595 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 TLR7Q9NYK1 1049 aaKnown RBP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 CCNL1Q9UK58 526 aaPredicted RBP6.2□□□□□ -1.42
LINC01541-202ENST00000568095 TBC1D2BQ9UPU7 963 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 DUOX1Q9NRD9 1551 aa6.2□□□□□ -1.42
LINC01541-202ENST00000568095 PSME4Q14997 1843 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 LRRIQ3A6PVS8 624 aaPredicted RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 PDIA3P30101 505 aaKnown RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 MDM2Q00987 491 aaPredicted RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 PARP10Q53GL7 1025 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 DNAJC21Q5F1R6 531 aaKnown RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 SLC10A5Q5PT55 438 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 SPECC1LQ69YQ0 1117 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 LMBR1LQ6UX01 489 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 KLHDC4Q8TBB5 520 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 KAT2BQ92831 832 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 ZNF622Q969S3 477 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 XAGE2Q96GT9 111 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 FSD1Q9BTV5 496 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 NAA15Q9BXJ9 866 aaKnown RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 CXorf56Q9H5V9 222 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 USTQ9Y2C2 406 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 CDK5RAP2Q96SN8 1893 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 CCDC196A0A1B0GTZ2 297 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 PBX1P40424 430 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 VSNL1P62760 191 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 AMPD2Q01433 879 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 GOLGA8FQ08AF8 430 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 GOLGA8DPQ0D2H9 430 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 NR1I3Q14994 352 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 ZRSR1Q15695 479 aaKnown RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 RASGRP2Q7LDG7 609 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 FAM89AQ96GI7 184 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 SEC62Q99442 399 aaKnown RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 RIPOR2Q9Y4F9 1068 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 ADGRG1Q9Y653 693 aa6.19□□□□□ -1.42
LINC01541-202ENST00000568095 DDX60LQ5H9U9 1706 aaKnown RBP6.19□□□□□ -1.42
LINC01541-202ENST00000568095 IRS2Q9Y4H2 1338 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms