RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 NAV1Q8NEY1 1877 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 APBB1O00213 710 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 GOLIM4O00461 696 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 RGS2P41220 211 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 ZSCAN25Q6NSZ9 544 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 CRISPLD2Q9H0B8 497 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 MCM9Q9NXL9 1143 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 SWAP70Q9UH65 585 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 GJD2Q9UKL4 321 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 COLQQ9Y215 455 aaPredicted RBP22.49■■□□□ 1.19
LINC01238-205ENST00000567549 NDUFB9Q9Y6M9 179 aa22.49■■□□□ 1.19
LINC01238-205ENST00000567549 PAGR1Q9BTK6 254 aa22.48■■□□□ 1.19
LINC01238-205ENST00000567549 EMILIN3Q9NT22 766 aa22.48■■□□□ 1.19
LINC01238-205ENST00000567549 PAG1Q9NWQ8 432 aa22.48■■□□□ 1.19
LINC01238-205ENST00000567549 ZKSCAN1P17029 563 aaPredicted RBP22.47■■□□□ 1.19
LINC01238-205ENST00000567549 PLEKHH3Q7Z736 793 aa22.47■■□□□ 1.19
LINC01238-205ENST00000567549 SH2D4AQ9H788 454 aa22.47■■□□□ 1.19
LINC01238-205ENST00000567549 ATP8A2Q9NTI2 1148 aa22.47■■□□□ 1.19
LINC01238-205ENST00000567549 IVNS1ABPQ9Y6Y0 642 aa22.47■■□□□ 1.19
LINC01238-205ENST00000567549 ZNF532Q9HCE3 1301 aa22.47■■□□□ 1.19
LINC01238-205ENST00000567549 CEP290O15078 2479 aa22.47■■□□□ 1.19
LINC01238-205ENST00000567549 ATP5JP18859 108 aa22.46■■□□□ 1.19
LINC01238-205ENST00000567549 JAG1P78504 1218 aa22.46■■□□□ 1.19
LINC01238-205ENST00000567549 ZYXQ15942 572 aaKnown RBP22.46■■□□□ 1.19
LINC01238-205ENST00000567549 APBA2Q99767 749 aa22.46■■□□□ 1.19
LINC01238-205ENST00000567549 RBPJLQ9UBG7 517 aa22.46■■□□□ 1.19
LINC01238-205ENST00000567549 MPHOSPH10O00566 681 aaKnown RBP22.45■■□□□ 1.18
LINC01238-205ENST00000567549 CYP2B6P20813 491 aa22.45■■□□□ 1.18
LINC01238-205ENST00000567549 LBX2Q6XYB7 198 aa22.45■■□□□ 1.18
LINC01238-205ENST00000567549 LRRCC1Q9C099 1032 aa22.45■■□□□ 1.18
LINC01238-205ENST00000567549 VCAM1P19320 739 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 DDX60LQ5H9U9 1706 aaKnown RBP22.44■■□□□ 1.18
LINC01238-205ENST00000567549 CHRDL2Q6WN34 429 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 CATSPERGQ6ZRH7 1159 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 TMEM179Q6ZVK1 233 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 GPR142Q7Z601 462 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 GPATCH3Q96I76 525 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 NBPF3Q9H094 633 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 TXNRD2Q9NNW7 524 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 HOXC10Q9NYD6 342 aa22.44■■□□□ 1.18
LINC01238-205ENST00000567549 MYH8P13535 1937 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 A0A1W2PPC1 479 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 SHMT1P34896 483 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 FXR1P51114 621 aaKnown RBP eCLIP22.43■■□□□ 1.18
LINC01238-205ENST00000567549 PLCD1P51178 756 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 TRIB2Q92519 343 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 PAWRQ96IZ0 340 aaKnown RBP22.43■■□□□ 1.18
LINC01238-205ENST00000567549 CCDC17Q96LX7 622 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 BCL11AQ9H165 835 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 ARHGEF10LQ9HCE6 1279 aa22.43■■□□□ 1.18
LINC01238-205ENST00000567549 DCP1AQ9NPI6 582 aaPredicted RBP22.43■■□□□ 1.18
LINC01238-205ENST00000567549 PRKAR2AP13861 404 aaKnown RBP22.42■■□□□ 1.18
LINC01238-205ENST00000567549 GABPAQ06546 454 aa22.42■■□□□ 1.18
LINC01238-205ENST00000567549 WDR78Q5VTH9 848 aa22.42■■□□□ 1.18
LINC01238-205ENST00000567549 MFSD14CQ5VZR4 134 aa22.42■■□□□ 1.18
LINC01238-205ENST00000567549 LPAR1Q92633 364 aa22.42■■□□□ 1.18
LINC01238-205ENST00000567549 HAUS7Q99871 368 aa22.42■■□□□ 1.18
LINC01238-205ENST00000567549 TCRBV5S4A2TA0A5A2 114 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 SLC15A5A6NIM6 579 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 ADD2P35612 726 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 MAP2K5Q13163 448 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 UBE3CQ15386 1083 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 SHROOM1Q2M3G4 852 aaPredicted RBP22.41■■□□□ 1.18
LINC01238-205ENST00000567549 MAP3K21Q5TCX8 1036 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 MB21D1Q8N884 522 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 BOLA2Q9H3K6 86 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 RPAP3Q9H6T3 665 aaPredicted RBP22.41■■□□□ 1.18
LINC01238-205ENST00000567549 PLXNB2O15031 1838 aa22.41■■□□□ 1.18
LINC01238-205ENST00000567549 MYH7P12883 1935 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 SEPT2Q15019 361 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 LRRFIP1Q32MZ4 808 aaKnown RBP22.4■■□□□ 1.18
LINC01238-205ENST00000567549 MORN1Q5T089 497 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 SIRT2Q8IXJ6 389 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 LCORLQ8N3X6 602 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 SDR42E1Q8WUS8 393 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 EDC3Q96F86 508 aaKnown RBP22.4■■□□□ 1.18
LINC01238-205ENST00000567549 PORCNQ9H237 461 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 SLC5A4Q9NY91 659 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 OGDHLQ9ULD0 1010 aa22.4■■□□□ 1.18
LINC01238-205ENST00000567549 MSCO60682 206 aa22.39■■□□□ 1.17
LINC01238-205ENST00000567549 MBD4O95243 580 aa22.39■■□□□ 1.17
LINC01238-205ENST00000567549 COG2Q14746 738 aa22.39■■□□□ 1.17
LINC01238-205ENST00000567549 Q3C1V9 767 aa22.39■■□□□ 1.17
LINC01238-205ENST00000567549 TANGO6Q9C0B7 1094 aa22.39■■□□□ 1.17
LINC01238-205ENST00000567549 C11orf49Q9H6J7 331 aa22.39■■□□□ 1.17
LINC01238-205ENST00000567549 ARMT1Q9H993 441 aa22.39■■□□□ 1.17
LINC01238-205ENST00000567549 STRNO43815 780 aa22.38■■□□□ 1.17
LINC01238-205ENST00000567549 ACER1Q8TDN7 264 aa22.38■■□□□ 1.17
LINC01238-205ENST00000567549 USP6NLQ92738 828 aa22.38■■□□□ 1.17
LINC01238-205ENST00000567549 ATP2B2Q01814 1243 aa22.37■■□□□ 1.17
LINC01238-205ENST00000567549 SPDYE16A6NNV3 312 aaPredicted RBP22.36■■□□□ 1.17
LINC01238-205ENST00000567549 PTPREP23469 700 aa22.36■■□□□ 1.17
LINC01238-205ENST00000567549 ICA1Q05084 483 aa22.36■■□□□ 1.17
LINC01238-205ENST00000567549 CACNB2Q08289 660 aaPredicted RBP22.36■■□□□ 1.17
LINC01238-205ENST00000567549 SHCBP1Q8NEM2 672 aa22.36■■□□□ 1.17
LINC01238-205ENST00000567549 ECHDC1Q9NTX5 307 aa22.36■■□□□ 1.17
LINC01238-205ENST00000567549 RBM27Q9P2N5 1060 aaKnown RBP22.36■■□□□ 1.17
LINC01238-205ENST00000567549 ARPP21Q9UBL0 812 aaPredicted RBP22.36■■□□□ 1.17
LINC01238-205ENST00000567549 TRIOBPQ9H2D6 2365 aa22.35■■□□□ 1.17
LINC01238-205ENST00000567549 HOXC6P09630 235 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms