RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.52
CMTM3-212ENST00000566121 PCDH10Q9P2E7 1040 aa18.33■□□□□ 0.52
CMTM3-212ENST00000566121 RANBP2P49792 3224 aaKnown RBP18.33■□□□□ 0.52
CMTM3-212ENST00000566121 HMGCRP04035 888 aa18.32■□□□□ 0.52
CMTM3-212ENST00000566121 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
CMTM3-212ENST00000566121 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
CMTM3-212ENST00000566121 ERVK-24P63145 666 aa18.32■□□□□ 0.52
CMTM3-212ENST00000566121 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-212ENST00000566121 ANKLE1Q8NAG6 615 aa18.32■□□□□ 0.52
CMTM3-212ENST00000566121 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
CMTM3-212ENST00000566121 ECHDC1Q9NTX5 307 aa18.32■□□□□ 0.52
CMTM3-212ENST00000566121 APBB1O00213 710 aa18.31■□□□□ 0.52
CMTM3-212ENST00000566121 GIMAP6Q6P9H5 292 aa18.31■□□□□ 0.52
CMTM3-212ENST00000566121 LCORLQ8N3X6 602 aa18.31■□□□□ 0.52
CMTM3-212ENST00000566121 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
CMTM3-212ENST00000566121 TXNRD2Q9NNW7 524 aa18.31■□□□□ 0.52
CMTM3-212ENST00000566121 RPTORQ8N122 1335 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 ELNP15502 786 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 C12orf60Q5U649 245 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 POTEEQ6S8J3 1075 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 TMEM179Q6ZVK1 233 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 NUDT12Q9BQG2 462 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 HTATIP2Q9BUP3 242 aa18.3■□□□□ 0.52
CMTM3-212ENST00000566121 VCAM1P19320 739 aa18.29■□□□□ 0.52
CMTM3-212ENST00000566121 CCNA1P78396 465 aa18.29■□□□□ 0.52
CMTM3-212ENST00000566121 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
CMTM3-212ENST00000566121 Q3C1V9 767 aa18.29■□□□□ 0.52
CMTM3-212ENST00000566121 MORN1Q5T089 497 aa18.29■□□□□ 0.52
CMTM3-212ENST00000566121 LPAR1Q92633 364 aa18.29■□□□□ 0.52
CMTM3-212ENST00000566121 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
CMTM3-212ENST00000566121 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
CMTM3-212ENST00000566121 GLRX3O76003 335 aaKnown RBP18.28■□□□□ 0.52
CMTM3-212ENST00000566121 MBD4O95243 580 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 SBK1Q52WX2 424 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 KBTBD3Q8NAB2 608 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 ACER1Q8TDN7 264 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 SDR42E1Q8WUS8 393 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 GPATCH3Q96I76 525 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 FEZ1Q99689 392 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 ARMT1Q9H993 441 aa18.28■□□□□ 0.52
CMTM3-212ENST00000566121 CNMDO75829 334 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 ECM2O94769 699 aaPredicted RBP18.27■□□□□ 0.52
CMTM3-212ENST00000566121 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.52
CMTM3-212ENST00000566121 HOXC6P09630 235 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 COG2Q14746 738 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 SEPT2Q15019 361 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 HABP4Q5JVS0 413 aaKnown RBP18.27■□□□□ 0.52
CMTM3-212ENST00000566121 C16orf86Q6ZW13 317 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 PLEKHH3Q7Z736 793 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 AMOTL1Q8IY63 956 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 DDRGK1Q96HY6 314 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 SH2D4AQ9H788 454 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 HMX1Q9NP08 348 aaPredicted RBP18.27■□□□□ 0.52
CMTM3-212ENST00000566121 TMX2Q9Y320 296 aa18.27■□□□□ 0.52
CMTM3-212ENST00000566121 TTC41PQ6P2S7 1318 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 MYCP01106 439 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-212ENST00000566121 IGHA2P01877 340 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 RGS2P41220 211 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 AAMPQ13685 434 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 LRRFIP1Q32MZ4 808 aaKnown RBP18.26■□□□□ 0.51
CMTM3-212ENST00000566121 GPR142Q7Z601 462 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 SIAH1Q8IUQ4 282 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 MB21D1Q8N884 522 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 DEFB118Q96PH6 123 aa18.26■□□□□ 0.51
CMTM3-212ENST00000566121 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
CMTM3-212ENST00000566121 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.513e-10■■■■■ 57.7
CMTM3-212ENST00000566121 A0A1W2PRG0 241 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 SLC15A5A6NIM6 579 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 USP17L12C9JPN9 530 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 USP17L21D6R901 530 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 STRNO43815 780 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 FARP2O94887 1054 aaPredicted RBP18.25■□□□□ 0.51
CMTM3-212ENST00000566121 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
CMTM3-212ENST00000566121 CDK8P49336 464 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 PUS7LQ9H0K6 701 aaKnown RBP18.25■□□□□ 0.51
CMTM3-212ENST00000566121 PORCNQ9H237 461 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 OGDHLQ9ULD0 1010 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 PLXNB2O15031 1838 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
CMTM3-212ENST00000566121 NAV1Q8NEY1 1877 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 SPDYE16A6NNV3 312 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-212ENST00000566121 PRKAB2O43741 272 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 SMARCA5O60264 1052 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-212ENST00000566121 GNAT2P19087 354 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 CTR9Q6PD62 1173 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 CCAR1Q8IX12 1150 aaKnown RBP18.24■□□□□ 0.51
CMTM3-212ENST00000566121 SHCBP1Q8NEM2 672 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 TRIB2Q92519 343 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 RPAP3Q9H6T3 665 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-212ENST00000566121 KANSL2Q9H9L4 492 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 ARPP21Q9UBL0 812 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-212ENST00000566121 NR2E3Q9Y5X4 410 aa18.24■□□□□ 0.51
CMTM3-212ENST00000566121 PTPREP23469 700 aa18.23■□□□□ 0.51
CMTM3-212ENST00000566121 MAP2K5Q13163 448 aa18.23■□□□□ 0.51
CMTM3-212ENST00000566121 APPBP2Q92624 585 aa18.23■□□□□ 0.51
CMTM3-212ENST00000566121 APBA2Q99767 749 aa18.23■□□□□ 0.51
CMTM3-212ENST00000566121 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
CMTM3-212ENST00000566121 ARHGEF10LQ9HCE6 1279 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms