RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 ZBED3Q96IU2 234 aaPredicted RBP22.43■■□□□ 1.18
PKD1-230ENST00000565639 ALG1Q9BT22 464 aa22.43■■□□□ 1.18
PKD1-230ENST00000565639 SLC26A6Q9BXS9 759 aa22.43■■□□□ 1.18
PKD1-230ENST00000565639 ZNF70Q9UC06 446 aaPredicted RBP22.43■■□□□ 1.18
PKD1-230ENST00000565639 EIF6P56537 245 aaKnown RBP22.43■■□□□ 1.18
PKD1-230ENST00000565639 SPDYE2Q495Y8 402 aa22.43■■□□□ 1.18
PKD1-230ENST00000565639 SH3BP5LQ7L8J4 393 aa22.43■■□□□ 1.18
PKD1-230ENST00000565639 METTL16Q86W50 562 aaKnown RBP22.43■■□□□ 1.18
PKD1-230ENST00000565639 CCDC17Q96LX7 622 aa22.43■■□□□ 1.18
PKD1-230ENST00000565639 RNF26Q9BY78 433 aaPredicted RBP22.43■■□□□ 1.18
PKD1-230ENST00000565639 SIPA1L1O43166 1804 aa22.42■■□□□ 1.18
PKD1-230ENST00000565639 PRPF40AO75400 957 aaKnown RBP22.42■■□□□ 1.18
PKD1-230ENST00000565639 KIF5BP33176 963 aa22.42■■□□□ 1.18
PKD1-230ENST00000565639 ZSCAN29Q8IWY8 852 aaPredicted RBP22.42■■□□□ 1.18
PKD1-230ENST00000565639 STX8Q9UNK0 236 aa22.42■■□□□ 1.18
PKD1-230ENST00000565639 DEXIO95424 95 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
PKD1-230ENST00000565639 DNM1Q05193 864 aaKnown RBP22.41■■□□□ 1.18
PKD1-230ENST00000565639 FUT2Q10981 343 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 TMTC3Q6ZXV5 915 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 DPF2Q92785 391 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 TMEM47Q9BQJ4 181 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.41■■□□□ 1.18
PKD1-230ENST00000565639 TCHHQ07283 1943 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 IGKV6D-41A0A0C4DH26 115 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 CSPP1Q1MSJ5 1256 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 CEP95Q96GE4 821 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 CNPY2Q9Y2B0 182 aa22.41■■□□□ 1.18
PKD1-230ENST00000565639 MYO1BO43795 1136 aa22.4■■□□□ 1.18
PKD1-230ENST00000565639 TOP1P11387 765 aaKnown RBP22.4■■□□□ 1.18
PKD1-230ENST00000565639 AKR1B1P15121 316 aa22.4■■□□□ 1.18
PKD1-230ENST00000565639 FOSBP53539 338 aa22.4■■□□□ 1.18
PKD1-230ENST00000565639 KRT85P78386 507 aa22.4■■□□□ 1.18
PKD1-230ENST00000565639 DNAJC18Q9H819 358 aa22.4■■□□□ 1.18
PKD1-230ENST00000565639 GUCY1B3Q02153 619 aa22.39■■□□□ 1.18
PKD1-230ENST00000565639 PPP4R3BQ5MIZ7 849 aa22.39■■□□□ 1.18
PKD1-230ENST00000565639 FAM151AQ8WW52 585 aa22.39■■□□□ 1.18
PKD1-230ENST00000565639 MYOZ2Q9NPC6 264 aa22.39■■□□□ 1.18
PKD1-230ENST00000565639 MTMR4Q9NYA4 1195 aa22.39■■□□□ 1.18
PKD1-230ENST00000565639 PRPF3O43395 683 aaKnown RBP22.39■■□□□ 1.17
PKD1-230ENST00000565639 GRM4Q14833 912 aa22.39■■□□□ 1.17
PKD1-230ENST00000565639 KLHL40Q2TBA0 621 aa22.39■■□□□ 1.17
PKD1-230ENST00000565639 TRIM34Q9BYJ4 488 aa22.39■■□□□ 1.17
PKD1-230ENST00000565639 GREB1LQ9C091 1923 aaPredicted RBP22.38■■□□□ 1.17
PKD1-230ENST00000565639 CLRN2A0PK11 232 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 PLEKHA8P1O95397 391 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 NCLP19338 710 aaKnown RBP22.38■■□□□ 1.17
PKD1-230ENST00000565639 GNAQP50148 359 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 AKAP17AQ02040 695 aaKnown RBP22.38■■□□□ 1.17
PKD1-230ENST00000565639 TRIM29Q14134 588 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 TATDN1Q6P1N9 297 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 ILDR2Q71H61 639 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 USP48Q86UV5 1035 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 CMTR1Q8N1G2 835 aaKnown RBP22.38■■□□□ 1.17
PKD1-230ENST00000565639 AIFM3Q96NN9 605 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 DDX49Q9Y6V7 483 aaKnown RBP22.38■■□□□ 1.17
PKD1-230ENST00000565639 TCP10L2B9ZVM9 353 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 WNT10BO00744 389 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 LMNB1P20700 586 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 KRT40Q6A162 431 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 ATL3Q6DD88 541 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 OTUD7BQ6GQQ9 843 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 ARHGAP27Q6ZUM4 889 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 FAM83AQ86UY5 434 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 CCDC82Q8N4S0 544 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 SYT17Q9BSW7 474 aa22.38■■□□□ 1.17
PKD1-230ENST00000565639 SCAND2PQ9GZW5 306 aaPredicted RBP22.37■■□□□ 1.17
PKD1-230ENST00000565639 HERC5Q9UII4 1024 aaKnown RBP22.37■■□□□ 1.17
PKD1-230ENST00000565639 CNTNAP1P78357 1384 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 DICER1Q9UPY3 1922 aaKnown RBP22.36■■□□□ 1.17
PKD1-230ENST00000565639 GMPSP49915 693 aaPredicted RBP22.36■■□□□ 1.17
PKD1-230ENST00000565639 FAM173BQ6P4H8 233 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 BRAPQ7Z569 592 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 CSRNP1Q96S65 589 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 GDPD2Q9HCC8 539 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 RBM27Q9P2N5 1060 aaKnown RBP22.36■■□□□ 1.17
PKD1-230ENST00000565639 CNTNAP5Q8WYK1 1306 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 FIBPO43427 364 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 GUCY1A2P33402 732 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 CERKLQ49MI3 558 aaPredicted RBP22.36■■□□□ 1.17
PKD1-230ENST00000565639 SRBD1Q8N5C6 995 aaKnown RBP22.36■■□□□ 1.17
PKD1-230ENST00000565639 GJB4Q9NTQ9 266 aa22.36■■□□□ 1.17
PKD1-230ENST00000565639 MYH6P13533 1939 aa22.35■■□□□ 1.17
PKD1-230ENST00000565639 TTLL1O95922 423 aa22.35■■□□□ 1.17
PKD1-230ENST00000565639 MBD3O95983 291 aa22.35■■□□□ 1.17
PKD1-230ENST00000565639 KIF23Q02241 960 aaPredicted RBP22.35■■□□□ 1.17
PKD1-230ENST00000565639 LZTS2Q9BRK4 669 aa22.35■■□□□ 1.17
PKD1-230ENST00000565639 VEZTQ9HBM0 779 aa22.35■■□□□ 1.17
PKD1-230ENST00000565639 MAD2L2Q9UI95 211 aa22.35■■□□□ 1.17
PKD1-230ENST00000565639 CFAP45Q9UL16 551 aa22.35■■□□□ 1.17
PKD1-230ENST00000565639 ELP1O95163 1332 aa22.34■■□□□ 1.17
PKD1-230ENST00000565639 PALM3A6NDB9 673 aaPredicted RBP22.34■■□□□ 1.17
PKD1-230ENST00000565639 UBE2Q2LH0YL09 131 aa22.34■■□□□ 1.17
PKD1-230ENST00000565639 NBPF9Q3BBW0 867 aa22.34■■□□□ 1.17
PKD1-230ENST00000565639 GJA3Q9Y6H8 435 aa22.34■■□□□ 1.17
PKD1-230ENST00000565639 V9GY48 417 aaPredicted RBP22.34■■□□□ 1.17
PKD1-230ENST00000565639 MYH15Q9Y2K3 1946 aa22.34■■□□□ 1.17
PKD1-230ENST00000565639 XBP1P17861 261 aa22.34■■□□□ 1.17
PKD1-230ENST00000565639 PKN1Q16512 942 aa22.34■■□□□ 1.17
PKD1-230ENST00000565639 MICALL2Q8IY33 904 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms