RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 C12orf42Q96LP6 360 aa25.39■■□□□ 1.66
HERC2-204ENST00000563945 NDUFB9Q9Y6M9 179 aa25.39■■□□□ 1.66
HERC2-204ENST00000563945 FOCADQ5VW36 1801 aa25.38■■□□□ 1.65
HERC2-204ENST00000563945 TTF1Q15361 905 aaPredicted RBP25.38■■□□□ 1.65
HERC2-204ENST00000563945 EDC3Q96F86 508 aaKnown RBP25.38■■□□□ 1.65
HERC2-204ENST00000563945 APBA2Q99767 749 aa25.38■■□□□ 1.65
HERC2-204ENST00000563945 EXOC6BQ9Y2D4 811 aa25.38■■□□□ 1.65
HERC2-204ENST00000563945 IVNS1ABPQ9Y6Y0 642 aa25.38■■□□□ 1.65
HERC2-204ENST00000563945 CDK5RAP2Q96SN8 1893 aa25.38■■□□□ 1.65
HERC2-204ENST00000563945 MYO5AQ9Y4I1 1855 aaKnown RBP25.38■■□□□ 1.65
HERC2-204ENST00000563945 MAGEB6P1A0A0J9YX57 407 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 RLBP1P12271 317 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 BMP8BP34820 402 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 MAP2K5Q13163 448 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 MORN1Q5T089 497 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 MFSD14CQ5VZR4 134 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 CEP85Q6P2H3 762 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 ANTXR1Q9H6X2 564 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 MYH1P12882 1939 aa25.37■■□□□ 1.65
HERC2-204ENST00000563945 SYN1P17600 705 aa25.36■■□□□ 1.65
HERC2-204ENST00000563945 CATSPERGQ6ZRH7 1159 aa25.36■■□□□ 1.65
HERC2-204ENST00000563945 USP6NLQ92738 828 aa25.36■■□□□ 1.65
HERC2-204ENST00000563945 GDF15Q99988 308 aa25.36■■□□□ 1.65
HERC2-204ENST00000563945 KIAA1683Q9H0B3 1180 aa25.36■■□□□ 1.65
HERC2-204ENST00000563945 CCL14Q16627 93 aa25.35■■□□□ 1.65
HERC2-204ENST00000563945 LRCH3Q96II8 777 aa25.35■■□□□ 1.65
HERC2-204ENST00000563945 CRNKL1Q9BZJ0 848 aaKnown RBP25.35■■□□□ 1.65
HERC2-204ENST00000563945 PLXNB2O15031 1838 aa25.35■■□□□ 1.65
HERC2-204ENST00000563945 SLC15A5A6NIM6 579 aa25.34■■□□□ 1.65
HERC2-204ENST00000563945 MPHOSPH10O00566 681 aaKnown RBP25.34■■□□□ 1.65
HERC2-204ENST00000563945 CCND3P30281 292 aaPredicted RBP25.34■■□□□ 1.65
HERC2-204ENST00000563945 MNX1P50219 401 aaPredicted RBP25.34■■□□□ 1.65
HERC2-204ENST00000563945 SOX1O00570 391 aaPredicted RBP25.33■■□□□ 1.65
HERC2-204ENST00000563945 VCAM1P19320 739 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 PLCD1P51178 756 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 ATP2B2Q01814 1243 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 SLC9C2Q5TAH2 1124 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 CLASRPQ8N2M8 674 aaKnown RBP25.33■■□□□ 1.65
HERC2-204ENST00000563945 SLC17A8Q8NDX2 589 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 ACER1Q8TDN7 264 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 BCL11AQ9H165 835 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 IL1RAPL2Q9NP60 686 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 MCM9Q9NXL9 1143 aa25.33■■□□□ 1.65
HERC2-204ENST00000563945 RANBP2P49792 3224 aaKnown RBP25.33■■□□□ 1.64
HERC2-204ENST00000563945 MS4A1P11836 297 aa25.32■■□□□ 1.64
HERC2-204ENST00000563945 CNGA1P29973 690 aa25.32■■□□□ 1.64
HERC2-204ENST00000563945 UBE2OQ9C0C9 1292 aaKnown RBP25.32■■□□□ 1.64
HERC2-204ENST00000563945 RPAP3Q9H6T3 665 aaPredicted RBP25.32■■□□□ 1.64
HERC2-204ENST00000563945 DDX60LQ5H9U9 1706 aaKnown RBP25.32■■□□□ 1.64
HERC2-204ENST00000563945 APBB1O00213 710 aa25.31■■□□□ 1.64
HERC2-204ENST00000563945 PTPREP23469 700 aa25.31■■□□□ 1.64
HERC2-204ENST00000563945 SHMT1P34896 483 aa25.31■■□□□ 1.64
HERC2-204ENST00000563945 MAGEA10P43363 369 aaPredicted RBP25.31■■□□□ 1.64
HERC2-204ENST00000563945 LHX8Q68G74 356 aa25.31■■□□□ 1.64
HERC2-204ENST00000563945 RHPN1Q8TCX5 695 aa25.31■■□□□ 1.64
HERC2-204ENST00000563945 RIOK1Q9BRS2 568 aaKnown RBP25.31■■□□□ 1.64
HERC2-204ENST00000563945 ALPK3Q96L96 1907 aa25.31■■□□□ 1.64
HERC2-204ENST00000563945 CNMDO75829 334 aa25.3■■□□□ 1.64
HERC2-204ENST00000563945 IFIT2P09913 472 aaKnown RBP25.3■■□□□ 1.64
HERC2-204ENST00000563945 SEPT2Q15019 361 aa25.3■■□□□ 1.64
HERC2-204ENST00000563945 HOXC10Q9NYD6 342 aa25.3■■□□□ 1.64
HERC2-204ENST00000563945 PFASO15067 1338 aa25.3■■□□□ 1.64
HERC2-204ENST00000563945 MSCO60682 206 aa25.29■■□□□ 1.64
HERC2-204ENST00000563945 PDE6AP16499 860 aa25.29■■□□□ 1.64
HERC2-204ENST00000563945 POTEEQ6S8J3 1075 aa25.29■■□□□ 1.64
HERC2-204ENST00000563945 LBX2Q6XYB7 198 aa25.29■■□□□ 1.64
HERC2-204ENST00000563945 TDHQ8IZJ6 230 aa25.29■■□□□ 1.64
HERC2-204ENST00000563945 PANK1Q8TE04 598 aa25.29■■□□□ 1.64
HERC2-204ENST00000563945 DNAJC2Q99543 621 aaKnown RBP25.29■■□□□ 1.64
HERC2-204ENST00000563945 HMMRO75330 724 aa25.28■■□□□ 1.64
HERC2-204ENST00000563945 COG2Q14746 738 aa25.28■■□□□ 1.64
HERC2-204ENST00000563945 DPP9Q86TI2 863 aa25.28■■□□□ 1.64
HERC2-204ENST00000563945 KIF1BPQ96EK5 621 aa25.28■■□□□ 1.64
HERC2-204ENST00000563945 BTBD7Q9P203 1132 aa25.28■■□□□ 1.64
HERC2-204ENST00000563945 SPDYE16A6NNV3 312 aaPredicted RBP25.27■■□□□ 1.64
HERC2-204ENST00000563945 GOLIM4O00461 696 aa25.27■■□□□ 1.64
HERC2-204ENST00000563945 COL6A1P12109 1028 aa25.27■■□□□ 1.64
HERC2-204ENST00000563945 GPR153Q6NV75 609 aa25.27■■□□□ 1.64
HERC2-204ENST00000563945 TANGO6Q9C0B7 1094 aa25.27■■□□□ 1.64
HERC2-204ENST00000563945 SZT2Q5T011 3432 aa25.27■■□□□ 1.64
HERC2-204ENST00000563945 ZNF532Q9HCE3 1301 aa25.27■■□□□ 1.64
HERC2-204ENST00000563945 LRIT3Q3SXY7 679 aa25.26■■□□□ 1.63
HERC2-204ENST00000563945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.26■■□□□ 1.63
HERC2-204ENST00000563945 SENP6Q9GZR1 1112 aaPredicted RBP25.26■■□□□ 1.63
HERC2-204ENST00000563945 DDX20Q9UHI6 824 aaKnown RBP25.26■■□□□ 1.63
HERC2-204ENST00000563945 HOXC6P09630 235 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 GUCY1A2P33402 732 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 GABPAQ06546 454 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 GRB14Q14449 540 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 LRRC26Q2I0M4 334 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 RPAP2Q8IXW5 612 aaPredicted RBP25.25■■□□□ 1.63
HERC2-204ENST00000563945 AMOTL1Q8IY63 956 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 DEFB123Q8N688 67 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 LBHD1Q9BQE6 289 aaPredicted RBP25.25■■□□□ 1.63
HERC2-204ENST00000563945 SLC5A4Q9NY91 659 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 FLRT1Q9NZU1 646 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 SWAP70Q9UH65 585 aa25.25■■□□□ 1.63
HERC2-204ENST00000563945 STRNO43815 780 aa25.24■■□□□ 1.63
HERC2-204ENST00000563945 TMEM179Q6ZVK1 233 aa25.24■■□□□ 1.63
HERC2-204ENST00000563945 SDR42E1Q8WUS8 393 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms