RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 RAG1P15918 1043 aa22.39■■□□□ 1.17
E4F1-203ENST00000563643 JAG1P78504 1218 aa22.39■■□□□ 1.17
E4F1-203ENST00000563643 GRB14Q14449 540 aa22.39■■□□□ 1.17
E4F1-203ENST00000563643 LRFN3Q9BTN0 628 aa22.39■■□□□ 1.17
E4F1-203ENST00000563643 RABGAP1Q9Y3P9 1069 aa22.39■■□□□ 1.17
E4F1-203ENST00000563643 KIAA0355O15063 1070 aa22.38■■□□□ 1.17
E4F1-203ENST00000563643 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
E4F1-203ENST00000563643 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
E4F1-203ENST00000563643 MECOMQ03112 1051 aa22.38■■□□□ 1.17
E4F1-203ENST00000563643 RASGRF1Q13972 1273 aa22.38■■□□□ 1.17
E4F1-203ENST00000563643 ADGRE1Q14246 886 aa22.38■■□□□ 1.17
E4F1-203ENST00000563643 IVNS1ABPQ9Y6Y0 642 aa22.38■■□□□ 1.17
E4F1-203ENST00000563643 ZBTB22O15209 634 aa22.37■■□□□ 1.17
E4F1-203ENST00000563643 SPTY2D1Q68D10 685 aaPredicted RBP22.37■■□□□ 1.17
E4F1-203ENST00000563643 EMILIN3Q9NT22 766 aa22.37■■□□□ 1.17
E4F1-203ENST00000563643 SEPT4O43236 478 aa22.36■■□□□ 1.17
E4F1-203ENST00000563643 PBX2P40425 430 aa22.36■■□□□ 1.17
E4F1-203ENST00000563643 LRRC41Q15345 812 aa22.36■■□□□ 1.17
E4F1-203ENST00000563643 SHROOM1Q2M3G4 852 aaPredicted RBP22.36■■□□□ 1.17
E4F1-203ENST00000563643 CCDC102BQ68D86 513 aa22.36■■□□□ 1.17
E4F1-203ENST00000563643 ZNF384Q8TF68 577 aa22.36■■□□□ 1.17
E4F1-203ENST00000563643 PBX4Q9BYU1 374 aa22.36■■□□□ 1.17
E4F1-203ENST00000563643 REV3LO60673 3130 aa22.35■■□□□ 1.17
E4F1-203ENST00000563643 CHD7Q9P2D1 2997 aa22.35■■□□□ 1.17
E4F1-203ENST00000563643 PDS5AQ29RF7 1337 aaKnown RBP22.35■■□□□ 1.17
E4F1-203ENST00000563643 MUC6Q6W4X9 2439 aa22.35■■□□□ 1.17
E4F1-203ENST00000563643 BMP1P13497 986 aa22.35■■□□□ 1.17
E4F1-203ENST00000563643 CXXC1Q9P0U4 656 aaPredicted RBP22.35■■□□□ 1.17
E4F1-203ENST00000563643 MAP4K4O95819 1239 aaPredicted RBP22.34■■□□□ 1.17
E4F1-203ENST00000563643 IGFBP4P22692 258 aa22.34■■□□□ 1.17
E4F1-203ENST00000563643 ADORA1P30542 326 aa22.34■■□□□ 1.17
E4F1-203ENST00000563643 OLFML2BQ68BL8 750 aa22.34■■□□□ 1.17
E4F1-203ENST00000563643 CCDC129Q6ZRS4 1044 aa22.34■■□□□ 1.17
E4F1-203ENST00000563643 CEP126Q9P2H0 1117 aa22.34■■□□□ 1.17
E4F1-203ENST00000563643 PI4KBQ9UBF8 816 aa22.34■■□□□ 1.17
E4F1-203ENST00000563643 ZBED9Q6R2W3 1325 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 PQBP1O60828 265 aaKnown RBP22.33■■□□□ 1.17
E4F1-203ENST00000563643 GDF11O95390 407 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 FAM47AQ5JRC9 791 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 MRPL50Q8N5N7 158 aaKnown RBP22.33■■□□□ 1.17
E4F1-203ENST00000563643 SSH1Q8WYL5 1049 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.33■■□□□ 1.171e-7■■■■■ 27.5
E4F1-203ENST00000563643 SIL1Q9H173 461 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 EPHX3Q9H6B9 360 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 DNAJC18Q9H819 358 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 TMEM39AQ9NV64 488 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 ZBTB21Q9ULJ3 1066 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 PHF24Q9UPV7 400 aa22.33■■□□□ 1.17
E4F1-203ENST00000563643 GRXCR1A8MXD5 290 aa22.32■■□□□ 1.16
E4F1-203ENST00000563643 USP17L2Q6R6M4 530 aa22.32■■□□□ 1.16
E4F1-203ENST00000563643 ERICH6Q7L0X2 663 aa22.32■■□□□ 1.16
E4F1-203ENST00000563643 TSPYL2Q9H2G4 693 aaPredicted RBP22.32■■□□□ 1.16
E4F1-203ENST00000563643 SIPA1L1O43166 1804 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L15C9J2P7 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L13C9JLJ4 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L11C9JVI0 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L18D6R9N7 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L22D6RA61 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L17D6RBQ6 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L19D6RCP7 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L20D6RJB6 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 CIAO1O76071 339 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 USP17L24Q0WX57 530 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 TMEM31Q5JXX7 168 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 DPP9Q86TI2 863 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 ALYREFQ86V81 257 aaKnown RBP22.31■■□□□ 1.16
E4F1-203ENST00000563643 TEX11Q8IYF3 940 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 GINM1Q9NU53 330 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 BTBD7Q9P203 1132 aa22.31■■□□□ 1.16
E4F1-203ENST00000563643 ADORA2AP29274 412 aa22.3■■□□□ 1.16
E4F1-203ENST00000563643 TFF2Q03403 129 aa22.3■■□□□ 1.16
E4F1-203ENST00000563643 DHX36Q9H2U1 1008 aaKnown RBP22.3■■□□□ 1.16
E4F1-203ENST00000563643 FBXO3Q9UK99 471 aa22.3■■□□□ 1.16
E4F1-203ENST00000563643 GSTO1P78417 241 aa22.29■■□□□ 1.16
E4F1-203ENST00000563643 ZYXQ15942 572 aaKnown RBP22.29■■□□□ 1.16
E4F1-203ENST00000563643 LBX2Q6XYB7 198 aa22.29■■□□□ 1.16
E4F1-203ENST00000563643 SNX27Q96L92 541 aa22.29■■□□□ 1.16
E4F1-203ENST00000563643 C12orf42Q96LP6 360 aa22.29■■□□□ 1.16
E4F1-203ENST00000563643 USP44Q9H0E7 712 aa22.29■■□□□ 1.16
E4F1-203ENST00000563643 PTPRCP08575 1304 aa22.29■■□□□ 1.16
E4F1-203ENST00000563643 LDHCP07864 332 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 KCNQ1P51787 676 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 FAAP100Q0VG06 881 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 AAK1Q2M2I8 961 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 PRAMEF19Q5SWL8 479 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 RASIP1Q5U651 963 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 SLC44A5Q8NCS7 719 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 NSUN4Q96CB9 384 aaKnown RBP22.28■■□□□ 1.16
E4F1-203ENST00000563643 TRIM34Q9BYJ4 488 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 SMC4Q9NTJ3 1288 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 ZNF236Q9UL36 1845 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 TCF20Q9UGU0 1960 aaKnown RBP22.28■■□□□ 1.16
E4F1-203ENST00000563643 MYO9BQ13459 2157 aa22.28■■□□□ 1.16
E4F1-203ENST00000563643 CATSPERGQ6ZRH7 1159 aa22.27■■□□□ 1.16
E4F1-203ENST00000563643 METTL16Q86W50 562 aaKnown RBP22.27■■□□□ 1.16
E4F1-203ENST00000563643 CRACR2BQ8N4Y2 399 aaPredicted RBP22.27■■□□□ 1.16
E4F1-203ENST00000563643 SH3RF3Q8TEJ3 882 aaPredicted RBP22.27■■□□□ 1.16
E4F1-203ENST00000563643 FEZ1Q99689 392 aa22.27■■□□□ 1.16
E4F1-203ENST00000563643 XPNPEP3Q9NQH7 507 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms