RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 ANKRD13CQ8N6S4 541 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 C12orf42Q96LP6 360 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 P2RX7Q99572 595 aaKnown RBP22.81■■□□□ 1.24
TRADD-203ENST00000563348 FEZ1Q99689 392 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 ARPP21Q9UBL0 812 aaPredicted RBP22.81■■□□□ 1.24
TRADD-203ENST00000563348 KIAA0100Q14667 2235 aaKnown RBP22.81■■□□□ 1.24
TRADD-203ENST00000563348 USP14P54578 494 aa22.8■■□□□ 1.24
TRADD-203ENST00000563348 IRX3P78415 501 aaPredicted RBP22.8■■□□□ 1.24
TRADD-203ENST00000563348 NUCB1Q02818 461 aa22.8■■□□□ 1.24
TRADD-203ENST00000563348 FAM110CQ1W6H9 321 aa22.8■■□□□ 1.24
TRADD-203ENST00000563348 TMEM179Q6ZVK1 233 aa22.8■■□□□ 1.24
TRADD-203ENST00000563348 CHD1LQ86WJ1 897 aa22.8■■□□□ 1.24
TRADD-203ENST00000563348 EVI5LQ96CN4 794 aa22.8■■□□□ 1.24
TRADD-203ENST00000563348 CCDC17Q96LX7 622 aa22.8■■□□□ 1.24
TRADD-203ENST00000563348 LOC285556D6RIA3 1793 aa22.79■■□□□ 1.24
TRADD-203ENST00000563348 PATL2C9JE40 543 aaKnown RBP22.79■■□□□ 1.24
TRADD-203ENST00000563348 NBPF11Q86T75 865 aa22.79■■□□□ 1.24
TRADD-203ENST00000563348 SEC62Q99442 399 aaKnown RBP22.79■■□□□ 1.24
TRADD-203ENST00000563348 AKR1B1P15121 316 aa22.78■■□□□ 1.24
TRADD-203ENST00000563348 MLLT1Q03111 559 aaPredicted RBP22.78■■□□□ 1.24
TRADD-203ENST00000563348 ZYXQ15942 572 aaKnown RBP22.78■■□□□ 1.24
TRADD-203ENST00000563348 SLC9C1Q4G0N8 1177 aa22.78■■□□□ 1.24
TRADD-203ENST00000563348 BAZ2AQ9UIF9 1905 aaKnown RBP22.78■■□□□ 1.24
TRADD-203ENST00000563348 APPP05067 770 aa22.77■■□□□ 1.24
TRADD-203ENST00000563348 TICAM2Q86XR7 235 aa22.77■■□□□ 1.24
TRADD-203ENST00000563348 IFNL3Q8IZI9 196 aa22.77■■□□□ 1.24
TRADD-203ENST00000563348 ZNF333Q96JL9 665 aa22.77■■□□□ 1.24
TRADD-203ENST00000563348 EPB41L4AQ9HCS5 686 aaPredicted RBP22.77■■□□□ 1.24
TRADD-203ENST00000563348 MORF4L1Q9UBU8 362 aa22.77■■□□□ 1.24
TRADD-203ENST00000563348 MYPNQ86TC9 1320 aa22.77■■□□□ 1.24
TRADD-203ENST00000563348 A0A1W2PRG0 241 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 MINDY4BA8MYZ0 360 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L15C9J2P7 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L13C9JLJ4 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L11C9JVI0 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L18D6R9N7 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L22D6RA61 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L17D6RBQ6 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L19D6RCP7 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L20D6RJB6 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 HERVK_113P62684 666 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 USP17L24Q0WX57 530 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 SIAH1Q8IUQ4 282 aa22.76■■□□□ 1.23
TRADD-203ENST00000563348 ZSWIM8A7E2V4 1837 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 TNPO2O14787 897 aaKnown RBP22.75■■□□□ 1.23
TRADD-203ENST00000563348 VCAM1P19320 739 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 TDO2P48775 406 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
TRADD-203ENST00000563348 PRKCZQ05513 592 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 CATSPERGQ6ZRH7 1159 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 PLEKHM2Q8IWE5 1019 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 RAET1EQ8TD07 263 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 NACAP1Q9BZK3 213 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 OSBPL3Q9H4L5 887 aa22.75■■□□□ 1.23
TRADD-203ENST00000563348 SH3TC2Q8TF17 1288 aa22.74■■□□□ 1.23
TRADD-203ENST00000563348 GTF3C2Q8WUA4 911 aaPredicted RBP22.74■■□□□ 1.23
TRADD-203ENST00000563348 RBPJLQ9UBG7 517 aa22.74■■□□□ 1.23
TRADD-203ENST00000563348 GABRQQ9UN88 632 aa22.74■■□□□ 1.23
TRADD-203ENST00000563348 GPRC5AQ8NFJ5 357 aa22.73■■□□□ 1.23
TRADD-203ENST00000563348 COA7Q96BR5 231 aa22.73■■□□□ 1.23
TRADD-203ENST00000563348 KANSL2Q9H9L4 492 aa22.73■■□□□ 1.23
TRADD-203ENST00000563348 MKNK2Q9HBH9 465 aa22.73■■□□□ 1.23
TRADD-203ENST00000563348 ARHGEF10LQ9HCE6 1279 aa22.73■■□□□ 1.23
TRADD-203ENST00000563348 TXNRD2Q9NNW7 524 aa22.73■■□□□ 1.23
TRADD-203ENST00000563348 TMX2Q9Y320 296 aa22.73■■□□□ 1.23
TRADD-203ENST00000563348 CENPFP49454 3210 aa22.72■■□□□ 1.23
TRADD-203ENST00000563348 GRK4P32298 578 aa22.72■■□□□ 1.23
TRADD-203ENST00000563348 FLT3LGP49771 235 aa22.72■■□□□ 1.23
TRADD-203ENST00000563348 ICA1Q05084 483 aa22.72■■□□□ 1.23
TRADD-203ENST00000563348 POTEEQ6S8J3 1075 aa22.72■■□□□ 1.23
TRADD-203ENST00000563348 HELLSQ9NRZ9 838 aa22.72■■□□□ 1.23
TRADD-203ENST00000563348 TRIM6-TRIM34B2RNG4 842 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 RASA1P20936 1047 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 IRF5Q13568 498 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 Q3C1V9 767 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 CCDC129Q6ZRS4 1044 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 CLEC10AQ8IUN9 316 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 STK11IPQ8N1F8 1099 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.71■■□□□ 1.23
TRADD-203ENST00000563348 TMEM106CQ9BVX2 250 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 RPAP3Q9H6T3 665 aaPredicted RBP22.71■■□□□ 1.23
TRADD-203ENST00000563348 SH2D4AQ9H788 454 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 ROBO3Q96MS0 1386 aa22.71■■□□□ 1.23
TRADD-203ENST00000563348 POTEFA5A3E0 1075 aa22.7■■□□□ 1.22
TRADD-203ENST00000563348 PEX10O60683 326 aa22.7■■□□□ 1.22
TRADD-203ENST00000563348 NAPBQ9H115 298 aa22.7■■□□□ 1.22
TRADD-203ENST00000563348 ZNF287Q9HBT7 754 aa22.7■■□□□ 1.22
TRADD-203ENST00000563348 RABGAP1Q9Y3P9 1069 aa22.7■■□□□ 1.22
TRADD-203ENST00000563348 DOCK3Q8IZD9 2030 aa22.7■■□□□ 1.22
TRADD-203ENST00000563348 EEF2P13639 858 aaKnown RBP22.69■■□□□ 1.22
TRADD-203ENST00000563348 ERVK-9P63128 1117 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 ERVK-24P63145 666 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 KIAA1755Q5JYT7 1200 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 LBX2Q6XYB7 198 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 SLAIN1Q8ND83 568 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 LPAR1Q92633 364 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 RILPL2Q969X0 211 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 PAGR1Q9BTK6 254 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 VCPKMTQ9H867 229 aa22.69■■□□□ 1.22
TRADD-203ENST00000563348 GJD2Q9UKL4 321 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms