RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 CCND3P30281 292 aaPredicted RBP16.25■□□□□ 0.19
SPG7-207ENST00000563218 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 ERVK-24P63145 666 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 EVX2Q03828 476 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 ANKLE1Q8NAG6 615 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 USP6NLQ92738 828 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 EAF2Q96CJ1 260 aaPredicted RBP16.25■□□□□ 0.19
SPG7-207ENST00000563218 GDF15Q99988 308 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 OGDHLQ9ULD0 1010 aa16.25■□□□□ 0.19
SPG7-207ENST00000563218 IDH1O75874 414 aaKnown RBP16.24■□□□□ 0.19
SPG7-207ENST00000563218 CACNB2Q08289 660 aaPredicted RBP16.24■□□□□ 0.19
SPG7-207ENST00000563218 CENPQQ7L2Z9 268 aaPredicted RBP16.24■□□□□ 0.19
SPG7-207ENST00000563218 GPR142Q7Z601 462 aa16.24■□□□□ 0.19
SPG7-207ENST00000563218 FOXP4Q8IVH2 680 aaPredicted RBP16.24■□□□□ 0.19
SPG7-207ENST00000563218 GPRC5AQ8NFJ5 357 aa16.24■□□□□ 0.19
SPG7-207ENST00000563218 ZNF512BQ96KM6 892 aaPredicted RBP16.24■□□□□ 0.19
SPG7-207ENST00000563218 NUDT12Q9BQG2 462 aa16.24■□□□□ 0.19
SPG7-207ENST00000563218 C11orf49Q9H6J7 331 aa16.24■□□□□ 0.19
SPG7-207ENST00000563218 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
SPG7-207ENST00000563218 A0A1W2PPC1 479 aa16.23■□□□□ 0.19
SPG7-207ENST00000563218 C19orf81C9J6K1 198 aa16.23■□□□□ 0.19
SPG7-207ENST00000563218 HLA-DOAP06340 250 aa16.23■□□□□ 0.19
SPG7-207ENST00000563218 MORN1Q5T089 497 aa16.23■□□□□ 0.19
SPG7-207ENST00000563218 MAGEB6Q8N7X4 407 aa16.23■□□□□ 0.19
SPG7-207ENST00000563218 NBPF3Q9H094 633 aa16.23■□□□□ 0.19
SPG7-207ENST00000563218 NOP58Q9Y2X3 529 aaKnown RBP16.23■□□□□ 0.19
SPG7-207ENST00000563218 ZKSCAN1P17029 563 aaPredicted RBP16.22■□□□□ 0.19
SPG7-207ENST00000563218 MAGEA10P43363 369 aaPredicted RBP16.22■□□□□ 0.19
SPG7-207ENST00000563218 USP17L2Q6R6M4 530 aa16.22■□□□□ 0.19
SPG7-207ENST00000563218 ACER1Q8TDN7 264 aa16.22■□□□□ 0.19
SPG7-207ENST00000563218 SOCS4Q8WXH5 440 aa16.22■□□□□ 0.19
SPG7-207ENST00000563218 RWDD1Q9H446 243 aaPredicted RBP16.22■□□□□ 0.19
SPG7-207ENST00000563218 FLRT1Q9NZU1 646 aa16.22■□□□□ 0.19
SPG7-207ENST00000563218 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 UNC80Q8N2C7 3258 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 CAPN2P17655 700 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 MAPK4P31152 587 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 USP5P45974 858 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 LHX8Q68G74 356 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 PLEKHH3Q7Z736 793 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 GINM1Q9NU53 330 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 EXOC6BQ9Y2D4 811 aa16.21■□□□□ 0.19
SPG7-207ENST00000563218 EYSQ5T1H1 3165 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 COL6A1P12109 1028 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 XRCC5P13010 732 aaKnown RBP16.2■□□□□ 0.18
SPG7-207ENST00000563218 GUCY1A2P33402 732 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 SHMT1P34896 483 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 PLCD1P51178 756 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 RAB3GAP1Q15042 981 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 LRRC26Q2I0M4 334 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 TATDN1Q6P1N9 297 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 Q7L0L9 218 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 C12orf42Q96LP6 360 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 APBA2Q99767 749 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 BTBD7Q9P203 1132 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 A0A0C4DFX4 3053 aa16.2■□□□□ 0.18
SPG7-207ENST00000563218 IGHDP01880 384 aa16.19■□□□□ 0.18
SPG7-207ENST00000563218 VCAM1P19320 739 aa16.19■□□□□ 0.18
SPG7-207ENST00000563218 BMP8BP34820 402 aa16.19■□□□□ 0.18
SPG7-207ENST00000563218 RGS2P41220 211 aa16.19■□□□□ 0.18
SPG7-207ENST00000563218 FEZ1Q99689 392 aa16.19■□□□□ 0.18
SPG7-207ENST00000563218 RIOK1Q9BRS2 568 aaKnown RBP16.19■□□□□ 0.18
SPG7-207ENST00000563218 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
SPG7-207ENST00000563218 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
SPG7-207ENST00000563218 CERKLQ49MI3 558 aaPredicted RBP16.18■□□□□ 0.18
SPG7-207ENST00000563218 CATSPERGQ6ZRH7 1159 aa16.18■□□□□ 0.18
SPG7-207ENST00000563218 AACSQ86V21 672 aa16.18■□□□□ 0.18
SPG7-207ENST00000563218 EHD4Q9H223 541 aa16.18■□□□□ 0.18
SPG7-207ENST00000563218 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
SPG7-207ENST00000563218 GREB1LQ9C091 1923 aaPredicted RBP16.17■□□□□ 0.18
SPG7-207ENST00000563218 SPDYE16A6NNV3 312 aaPredicted RBP16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L15C9J2P7 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L13C9JLJ4 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L11C9JVI0 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L18D6R9N7 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L22D6RA61 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L17D6RBQ6 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L19D6RCP7 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L20D6RJB6 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 USP17L24Q0WX57 530 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 MAP2K5Q13163 448 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 WDR78Q5VTH9 848 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 CCAR1Q8IX12 1150 aaKnown RBP16.17■□□□□ 0.18
SPG7-207ENST00000563218 NPLOC4Q8TAT6 608 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 GTF3C2Q8WUA4 911 aaPredicted RBP16.17■□□□□ 0.18
SPG7-207ENST00000563218 RABGAP1Q9Y3P9 1069 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 MYH4Q9Y623 1939 aa16.17■□□□□ 0.18
SPG7-207ENST00000563218 SEPT2Q15019 361 aa16.16■□□□□ 0.18
SPG7-207ENST00000563218 SLFNL1Q499Z3 407 aa16.16■□□□□ 0.18
SPG7-207ENST00000563218 TRMT44Q8IYL2 757 aaKnown RBP16.16■□□□□ 0.18
SPG7-207ENST00000563218 TDHQ8IZJ6 230 aa16.16■□□□□ 0.18
SPG7-207ENST00000563218 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
SPG7-207ENST00000563218 RPAP3Q9H6T3 665 aaPredicted RBP16.16■□□□□ 0.18
SPG7-207ENST00000563218 CWC22Q9HCG8 908 aaKnown RBP16.16■□□□□ 0.18
SPG7-207ENST00000563218 A0A1W2PRG0 241 aa16.15■□□□□ 0.18
SPG7-207ENST00000563218 CYP2D6P10635 497 aa16.15■□□□□ 0.18
SPG7-207ENST00000563218 PTPREP23469 700 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms