RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 MFSD2AQ8NA29 543 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 BAHD1Q8TBE0 780 aaPredicted RBP8.71□□□□□ -1.02
LINC00557-201ENST00000563184 CYB5D2Q8WUJ1 264 aa8.71□□□□□ -1.02
LINC00557-201ENST00000563184 RBAK-RBAKDNI3L0D1 243 aa8.7□□□□□ -1.02
LINC00557-201ENST00000563184 ITGB7P26010 798 aa8.7□□□□□ -1.02
LINC00557-201ENST00000563184 UNC5AQ6ZN44 842 aa8.7□□□□□ -1.02
LINC00557-201ENST00000563184 SHISA5Q8N114 240 aa8.7□□□□□ -1.02
LINC00557-201ENST00000563184 DNAJB8Q8NHS0 232 aa8.7□□□□□ -1.02
LINC00557-201ENST00000563184 RIN3Q8TB24 985 aa8.7□□□□□ -1.02
LINC00557-201ENST00000563184 LNPKQ9C0E8 428 aa8.7□□□□□ -1.02
LINC00557-201ENST00000563184 ADMP35318 185 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 SERINC3Q13530 473 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 RAB33AQ14088 237 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 PPP2R5EQ16537 467 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 NBPF6Q5VWK0 638 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 PHACTR4Q8IZ21 702 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 CELF2-AS1Q8N7Q2 184 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 PMFBP1Q8TBY8 1022 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 CCDC74BQ96LY2 380 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 NBPF4Q96M43 638 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 MIPEPQ99797 713 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 PRDM10Q9NQV6 1147 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 ACTR10Q9NZ32 417 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 LTBP3Q9NS15 1303 aa8.69□□□□□ -1.02
LINC00557-201ENST00000563184 COL17A1Q9UMD9 1497 aaPredicted RBP8.69□□□□□ -1.02
LINC00557-201ENST00000563184 FAM86C2PA6NEL3 165 aa8.68□□□□□ -1.02
LINC00557-201ENST00000563184 LEFTY1O75610 366 aa8.68□□□□□ -1.02
LINC00557-201ENST00000563184 TMEM192Q8IY95 271 aa8.68□□□□□ -1.02
LINC00557-201ENST00000563184 TOP6BLQ8N6T0 577 aa8.68□□□□□ -1.02
LINC00557-201ENST00000563184 MICAL1Q8TDZ2 1067 aa8.68□□□□□ -1.02
LINC00557-201ENST00000563184 DUSP23Q9BVJ7 150 aa8.68□□□□□ -1.02
LINC00557-201ENST00000563184 STOML1Q9UBI4 398 aa8.68□□□□□ -1.02
LINC00557-201ENST00000563184 EOMESO95936 686 aa8.67□□□□□ -1.02
LINC00557-201ENST00000563184 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
LINC00557-201ENST00000563184 DPH6Q7L8W6 267 aa8.67□□□□□ -1.02
LINC00557-201ENST00000563184 CNTNAP4Q9C0A0 1308 aa8.66□□□□□ -1.02
LINC00557-201ENST00000563184 CCNFP41002 786 aa8.66□□□□□ -1.02
LINC00557-201ENST00000563184 SOGA3Q5TF21 947 aa8.66□□□□□ -1.02
LINC00557-201ENST00000563184 FAM214BQ7L5A3 538 aa8.66□□□□□ -1.02
LINC00557-201ENST00000563184 ZAR1Q86SH2 424 aa8.66□□□□□ -1.02
LINC00557-201ENST00000563184 CDH24Q86UP0 819 aa8.66□□□□□ -1.02
LINC00557-201ENST00000563184 CEP131Q9UPN4 1083 aa8.66□□□□□ -1.02
LINC00557-201ENST00000563184 FAM87AP0C7U9 286 aa8.65□□□□□ -1.02
LINC00557-201ENST00000563184 GBP1P32455 592 aa8.65□□□□□ -1.02
LINC00557-201ENST00000563184 RNF43Q68DV7 783 aa8.65□□□□□ -1.02
LINC00557-201ENST00000563184 PPFIBP1Q86W92 1011 aa8.65□□□□□ -1.02
LINC00557-201ENST00000563184 SLC6A18Q96N87 628 aa8.65□□□□□ -1.02
LINC00557-201ENST00000563184 TBC1D32Q96NH3 1257 aa8.65□□□□□ -1.02
LINC00557-201ENST00000563184 SLC12A7Q9Y666 1083 aa8.65□□□□□ -1.02
LINC00557-201ENST00000563184 LARP1BQ659C4 914 aaKnown RBP8.64□□□□□ -1.03
LINC00557-201ENST00000563184 VWCEQ96DN2 955 aa8.64□□□□□ -1.03
LINC00557-201ENST00000563184 MFSD14AQ96MC6 490 aa8.64□□□□□ -1.03
LINC00557-201ENST00000563184 TRIM55Q9BYV6 548 aa8.64□□□□□ -1.03
LINC00557-201ENST00000563184 OSBPL2Q9H1P3 480 aa8.64□□□□□ -1.03
LINC00557-201ENST00000563184 ZNF214Q9UL59 606 aaPredicted RBP8.64□□□□□ -1.03
LINC00557-201ENST00000563184 PCDHB10Q9UN67 800 aa8.64□□□□□ -1.03
LINC00557-201ENST00000563184 R3HCC1Q9Y3T6 440 aaKnown RBP8.64□□□□□ -1.03
LINC00557-201ENST00000563184 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
LINC00557-201ENST00000563184 B2RBV5 119 aa8.63□□□□□ -1.03
LINC00557-201ENST00000563184 F13BP05160 661 aa8.63□□□□□ -1.03
LINC00557-201ENST00000563184 PMS1P54277 932 aaKnown RBP8.63□□□□□ -1.03
LINC00557-201ENST00000563184 DDR2Q16832 855 aa8.63□□□□□ -1.03
LINC00557-201ENST00000563184 CCDC144BQ3MJ40 725 aa8.63□□□□□ -1.03
LINC00557-201ENST00000563184 OGFOD3Q6PK18 319 aa8.63□□□□□ -1.03
LINC00557-201ENST00000563184 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
LINC00557-201ENST00000563184 SUCOQ9UBS9 1254 aaKnown RBP8.63□□□□□ -1.03
LINC00557-201ENST00000563184 NFIAQ12857 509 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 FXNQ16595 210 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 PRSS36Q5K4E3 855 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 C6orf15Q6UXA7 325 aaPredicted RBP8.62□□□□□ -1.03
LINC00557-201ENST00000563184 KLHL6Q8WZ60 621 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 HEXIM2Q96MH2 286 aaKnown RBP8.62□□□□□ -1.03
LINC00557-201ENST00000563184 KREMEN1Q96MU8 473 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00557-201ENST00000563184 PIF1Q9H611 641 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 PHAXQ9H814 394 aaKnown RBP8.62□□□□□ -1.03
LINC00557-201ENST00000563184 SIRPGQ9P1W8 387 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 MSRB2Q9Y3D2 182 aa8.62□□□□□ -1.03
LINC00557-201ENST00000563184 C9IYK1 514 aa8.61□□□□□ -1.03
LINC00557-201ENST00000563184 CLEC3AO75596 197 aa8.61□□□□□ -1.03
LINC00557-201ENST00000563184 GJB6O95452 261 aa8.61□□□□□ -1.03
LINC00557-201ENST00000563184 ZMYM1Q5SVZ6 1142 aa8.61□□□□□ -1.03
LINC00557-201ENST00000563184 TDRD10Q5VZ19 366 aaKnown RBP8.61□□□□□ -1.03
LINC00557-201ENST00000563184 MRM1Q6IN84 353 aaKnown RBP8.61□□□□□ -1.03
LINC00557-201ENST00000563184 ZNF765Q7L2R6 523 aa8.61□□□□□ -1.03
LINC00557-201ENST00000563184 FBXL6Q8N531 539 aa8.61□□□□□ -1.03
LINC00557-201ENST00000563184 ZNF512BQ96KM6 892 aaPredicted RBP8.61□□□□□ -1.03
LINC00557-201ENST00000563184 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
LINC00557-201ENST00000563184 FSTP19883 344 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 ETV3P41162 512 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 RASA3Q14644 834 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 NBPF12Q5TAG4 269 aaPredicted RBP8.6□□□□□ -1.03
LINC00557-201ENST00000563184 VHLLQ6RSH7 139 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 FAM178BQ8IXR5 827 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 Q8N3U1 123 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 GIMAP7Q8NHV1 300 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 RNF141Q8WVD5 230 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 DHRS1Q96LJ7 313 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 MAPK8IP1Q9UQF2 711 aa8.6□□□□□ -1.03
LINC00557-201ENST00000563184 U3KQE9 123 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms