RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 VGLL2Q8N8G2 317 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 TC2NQ8N9U0 490 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 CTCFLQ8NI51 663 aaPredicted RBP15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 BCAS4Q8TDM0 211 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 EHD4Q9H223 541 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 VEZTQ9HBM0 779 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 E7EWF7 191 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 FOXP2O15409 715 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 SHOX2O60902 331 aaPredicted RBP15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 ATL3Q6DD88 541 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 TMED8Q6PL24 325 aaPredicted RBP15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 INTS13Q9NVM9 706 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 MCM8Q9UJA3 840 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 RFX7Q2KHR2 1363 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 KIF5CO60282 957 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CCDC175P0C221 793 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 PAX7P23759 505 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 TUBB4BP68371 445 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CCDC102BQ68D86 513 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 ZKSCAN4Q969J2 545 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 DSCC1Q9BVC3 393 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 A0A0U1RQJ8 604 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 A0A1W2PQ27 194 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 A0A1W2PQ64 194 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 A0A1W2PQD8 194 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CTAGE15A4D2H0 777 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 ECM2O94769 699 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 ZNF202O95125 648 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CTAGE8P0CG41 777 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CALRP27797 417 aaKnown RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 NF2P35240 595 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 DDR1Q08345 913 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 ZNF569Q5MCW4 686 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 SLC9C2Q5TAH2 1124 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CTAGE6Q86UF2 777 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CTAGE4Q8IX94 777 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 NOA1Q8NC60 698 aaKnown RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 TBC1D22AQ8WUA7 517 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 ATRIPQ8WXE1 791 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 VIPAS39Q9H9C1 493 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 NCOA5Q9HCD5 579 aaKnown RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 IRF6O14896 467 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 FGAP02671 866 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 IBSPP21815 317 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 NAIF1Q69YI7 327 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 ILDR1Q86SU0 546 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 RAB11FIP4Q86YS3 637 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 CCDC24Q8N4L8 307 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 SMARCC2Q8TAQ2 1214 aa15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 PIH1D3Q9NQM4 214 aaKnown RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 IQSEC3Q9UPP2 1182 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-203ENST00000562609 SHTN1A0MZ66 631 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 TBX2Q13207 712 aaPredicted RBP15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 FAM76AQ8TAV0 307 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 DENND2AQ9ULE3 1009 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 SAMM50Q9Y512 469 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 MYH3P11055 1940 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 WNK3Q9BYP7 1800 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 STK38Q15208 465 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 HPCAL4Q9UM19 191 aa15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 MYO5AQ9Y4I1 1855 aaKnown RBP15.85■□□□□ 0.13
GTF3C1-203ENST00000562609 NRAPQ86VF7 1730 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 CHUKO15111 745 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 GPAA1O43292 621 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 TUBBP07437 444 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 ATP2B2Q01814 1243 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 LINC00116Q8NCU8 138 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 NSUN7Q8NE18 718 aaKnown RBP15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 GDAP1L1Q96MZ0 367 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 PTPDC1A2A3K4 754 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 CTAGE9A4FU28 777 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 SOWAHDA6NJG2 315 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 GGCXP38435 758 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 TTC19Q6DKK2 380 aaPredicted RBP15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 JMYQ8N9B5 988 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 TAOK2Q9UL54 1235 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 WWC3Q9ULE0 1092 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 ANKRD36CQ5JPF3 1778 aa15.84■□□□□ 0.13
GTF3C1-203ENST00000562609 FNTAP49354 379 aa15.83■□□□□ 0.13
GTF3C1-203ENST00000562609 AKAP17AQ02040 695 aaKnown RBP15.83■□□□□ 0.13
GTF3C1-203ENST00000562609 ODF2LQ9ULJ1 636 aa15.83■□□□□ 0.13
GTF3C1-203ENST00000562609 KIF3CO14782 793 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 GCFC2P16383 781 aaKnown RBP15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 STIM1Q13586 685 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 WDR93Q6P2C0 686 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 BARGINQ6ZT62 677 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 C3orf67Q6ZVT6 689 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 TEX11Q8IYF3 940 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 APPBP2Q92624 585 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 RBM28Q9NW13 759 aaKnown RBP15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 RTEL1Q9NZ71 1219 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 CLIC4Q9Y696 253 aa15.83■□□□□ 0.12
GTF3C1-203ENST00000562609 SPECC1LQ69YQ0 1117 aa15.82■□□□□ 0.12
GTF3C1-203ENST00000562609 FAM43BQ6ZT52 329 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms