RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CLEC10AQ8IUN9 316 aa23.76■■□□□ 1.39
TSPAN3-210ENST00000561277 CD99L2Q8TCZ2 262 aa23.76■■□□□ 1.39
TSPAN3-210ENST00000561277 MKNK2Q9HBH9 465 aa23.76■■□□□ 1.39
TSPAN3-210ENST00000561277 SLC45A1Q9Y2W3 748 aa23.76■■□□□ 1.39
TSPAN3-210ENST00000561277 HIP1O00291 1037 aa23.75■■□□□ 1.39
TSPAN3-210ENST00000561277 SKAP1Q86WV1 359 aa23.75■■□□□ 1.39
TSPAN3-210ENST00000561277 SMCR8Q8TEV9 937 aaPredicted RBP23.75■■□□□ 1.39
TSPAN3-210ENST00000561277 CCDC17Q96LX7 622 aa23.75■■□□□ 1.39
TSPAN3-210ENST00000561277 MCOLN1Q9GZU1 580 aa23.75■■□□□ 1.39
TSPAN3-210ENST00000561277 PRDM1O75626 825 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 PPARAQ07869 468 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 ERO1AQ96HE7 468 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 ADGRA2Q96PE1 1338 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 ECM2O94769 699 aaPredicted RBP23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 HSPD1P10809 573 aaKnown RBP23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 ICA1Q05084 483 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 USP17L2Q6R6M4 530 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 C17orf99Q6UX52 265 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 EMILIN3Q9NT22 766 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 PNMA3Q9UL41 463 aa23.74■■□□□ 1.39
TSPAN3-210ENST00000561277 RASA1P20936 1047 aa23.73■■□□□ 1.39
TSPAN3-210ENST00000561277 MFAP1P55081 439 aaKnown RBP23.73■■□□□ 1.39
TSPAN3-210ENST00000561277 PABPC4Q13310 644 aaKnown RBP eCLIP23.73■■□□□ 1.394e-7■■■■□ 24.1
TSPAN3-210ENST00000561277 KIAA1683Q9H0B3 1180 aa23.73■■□□□ 1.39
TSPAN3-210ENST00000561277 SLC3A2P08195 630 aaKnown RBP23.72■■□□□ 1.39
TSPAN3-210ENST00000561277 ZNF287Q9HBT7 754 aa23.72■■□□□ 1.39
TSPAN3-210ENST00000561277 A0A1W2PRG0 241 aa23.71■■□□□ 1.39
TSPAN3-210ENST00000561277 USP14P54578 494 aa23.71■■□□□ 1.39
TSPAN3-210ENST00000561277 ATP2B2Q01814 1243 aa23.71■■□□□ 1.39
TSPAN3-210ENST00000561277 CTDSPL2Q05D32 466 aa23.71■■□□□ 1.39
TSPAN3-210ENST00000561277 ASCC2Q9H1I8 757 aaPredicted RBP23.71■■□□□ 1.39
TSPAN3-210ENST00000561277 TRIM17Q9Y577 477 aa23.71■■□□□ 1.39
TSPAN3-210ENST00000561277 FGAP02671 866 aa23.7■■□□□ 1.38
TSPAN3-210ENST00000561277 OSBPP22059 807 aa23.7■■□□□ 1.38
TSPAN3-210ENST00000561277 IRX3P78415 501 aaPredicted RBP23.7■■□□□ 1.38
TSPAN3-210ENST00000561277 CAP1Q01518 475 aa23.7■■□□□ 1.38
TSPAN3-210ENST00000561277 PDE4BQ07343 736 aa23.7■■□□□ 1.38
TSPAN3-210ENST00000561277 ARHGEF10LQ9HCE6 1279 aa23.7■■□□□ 1.38
TSPAN3-210ENST00000561277 LACTBP83111 547 aaPredicted RBP23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 ALX1Q15699 326 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 ZNF444Q8N0Y2 327 aaPredicted RBP23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 C12orf42Q96LP6 360 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 ZSWIM8A7E2V4 1837 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 VCAM1P19320 739 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 OTOP1Q7RTM1 612 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 ARHGAP39Q9C0H5 1083 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 KANSL2Q9H9L4 492 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 EFCC1Q9HA90 598 aa23.69■■□□□ 1.38
TSPAN3-210ENST00000561277 BCRP11274 1271 aa23.68■■□□□ 1.38
TSPAN3-210ENST00000561277 HOXA7P31268 230 aaPredicted RBP23.68■■□□□ 1.38
TSPAN3-210ENST00000561277 KIF22Q14807 665 aa23.68■■□□□ 1.38
TSPAN3-210ENST00000561277 SIAH1Q8IUQ4 282 aa23.68■■□□□ 1.38
TSPAN3-210ENST00000561277 ABHD8Q96I13 439 aa23.68■■□□□ 1.38
TSPAN3-210ENST00000561277 IL25Q9H293 177 aa23.68■■□□□ 1.38
TSPAN3-210ENST00000561277 HTTP42858 3142 aa23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 ZMYM6O95789 1325 aa23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 GREB1LQ9C091 1923 aaPredicted RBP23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 EEF2P13639 858 aaKnown RBP23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 HAND2P61296 217 aa23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 ANKRD13CQ8N6S4 541 aa23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 SH2D4AQ9H788 454 aa23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 INCENPQ9NQS7 918 aa23.67■■□□□ 1.38
TSPAN3-210ENST00000561277 CHMLP26374 656 aa23.66■■□□□ 1.38
TSPAN3-210ENST00000561277 PKN2Q16513 984 aaKnown RBP23.66■■□□□ 1.38
TSPAN3-210ENST00000561277 FAM47AQ5JRC9 791 aa23.66■■□□□ 1.38
TSPAN3-210ENST00000561277 ANAPC4Q9UJX5 808 aa23.66■■□□□ 1.38
TSPAN3-210ENST00000561277 TMX2Q9Y320 296 aa23.66■■□□□ 1.38
TSPAN3-210ENST00000561277 CAPN15O75808 1086 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 TSPY3P0CV98 308 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 TSPY8P0CW00 308 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 SPICE1Q8N0Z3 855 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 P2RX7Q99572 595 aaKnown RBP23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 RPAP3Q9H6T3 665 aaPredicted RBP23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L15C9J2P7 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L13C9JLJ4 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L11C9JVI0 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L18D6R9N7 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L22D6RA61 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L17D6RBQ6 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L19D6RCP7 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L20D6RJB6 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 RAD21O60216 631 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 HERVK_113P62684 666 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 USP17L24Q0WX57 530 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 ARHGEF6Q15052 776 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 TOMM22Q9NS69 142 aa23.65■■□□□ 1.38
TSPAN3-210ENST00000561277 CTGFP29279 349 aa23.64■■□□□ 1.37
TSPAN3-210ENST00000561277 PSMC4P43686 418 aa23.64■■□□□ 1.37
TSPAN3-210ENST00000561277 GCLCP48506 637 aaPredicted RBP23.64■■□□□ 1.37
TSPAN3-210ENST00000561277 TFAP4Q01664 338 aa23.64■■□□□ 1.37
TSPAN3-210ENST00000561277 KIAA1755Q5JYT7 1200 aa23.64■■□□□ 1.37
TSPAN3-210ENST00000561277 RUFY2Q8WXA3 655 aa23.64■■□□□ 1.37
TSPAN3-210ENST00000561277 TACC3Q9Y6A5 838 aa23.64■■□□□ 1.37
TSPAN3-210ENST00000561277 RAD50Q92878 1312 aa23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 CENPFP49454 3210 aa23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 TSPY2A6NKD2 308 aa23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 FMNL1O95466 1100 aaPredicted RBP23.63■■□□□ 1.37
TSPAN3-210ENST00000561277 FBXO46Q6PJ61 603 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms