RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FILIP1Q7Z7B0 1213 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
TPM1-210ENST00000558264 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 TBC1D16Q8TBP0 767 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
TPM1-210ENST00000558264 MXD3Q9BW11 206 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 CPVLQ9H3G5 476 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 MKRN1Q9UHC7 482 aaKnown RBP12.14□□□□□ -0.47
TPM1-210ENST00000558264 FBXO2Q9UK22 296 aaPredicted RBP12.14□□□□□ -0.47
TPM1-210ENST00000558264 KRT2P35908 639 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 RILPL1Q5EBL4 403 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 NOL10Q9BSC4 688 aaKnown RBP12.14□□□□□ -0.47
TPM1-210ENST00000558264 PHF20Q9BVI0 1012 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
TPM1-210ENST00000558264 STX8Q9UNK0 236 aa12.14□□□□□ -0.47
TPM1-210ENST00000558264 CCDC88AQ3V6T2 1871 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 POLR2DO15514 142 aaKnown RBP12.13□□□□□ -0.47
TPM1-210ENST00000558264 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
TPM1-210ENST00000558264 DDAH1O94760 285 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 BAG3O95817 575 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 RCAN1P53805 252 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 GTF2IP78347 998 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 ZNF174Q15697 407 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 FOXP4Q8IVH2 680 aaPredicted RBP12.13□□□□□ -0.47
TPM1-210ENST00000558264 CSRNP2Q9H175 543 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 KAT14Q9H8E8 782 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
TPM1-210ENST00000558264 RBM28Q9NW13 759 aaKnown RBP12.13□□□□□ -0.47
TPM1-210ENST00000558264 KIAA1551Q9HCM1 1747 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 MYH6P13533 1939 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 CAVIN2O95810 425 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 XBP1P17861 261 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 LMOD1P29536 600 aaPredicted RBP12.13□□□□□ -0.47
TPM1-210ENST00000558264 NLRP12P59046 1061 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 PTPN21Q16825 1174 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
TPM1-210ENST00000558264 NAT10Q9H0A0 1025 aaKnown RBP12.13□□□□□ -0.47
TPM1-210ENST00000558264 CALM1P0DP23 149 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 CALM2P0DP24 149 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 CALM3P0DP25 149 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 PCP11498 1178 aaKnown RBP12.12□□□□□ -0.47
TPM1-210ENST00000558264 ATP2B4P23634 1241 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 PICALMQ13492 652 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 NPY5RQ15761 445 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 KRBA2Q6ZNG9 492 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 PNMA1Q8ND90 353 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 KIAA1524Q8TCG1 905 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 RASGRP4Q8TDF6 673 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 CACTINQ8WUQ7 758 aaKnown RBP12.12□□□□□ -0.47
TPM1-210ENST00000558264 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 SMC2O95347 1197 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 PTPREP23469 700 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 NLRP5P59047 1200 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 GSTO1P78417 241 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 EPSTI1Q96J88 318 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
TPM1-210ENST00000558264 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 LAMB1P07942 1786 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 PPEF1O14829 653 aaPredicted RBP12.11□□□□□ -0.47
TPM1-210ENST00000558264 ATP1A3P13637 1013 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 CASP1P29466 404 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
TPM1-210ENST00000558264 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
TPM1-210ENST00000558264 TRIM75PA6NK02 468 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 SCG2P13521 617 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
TPM1-210ENST00000558264 RGS22Q8NE09 1264 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 IFNKQ9P0W0 207 aa12.11□□□□□ -0.47
TPM1-210ENST00000558264 A0A087X0B3 334 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 BBOX1O75936 387 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 PPP2R5BQ15173 497 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 SARM1Q6SZW1 724 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 AMOTL1Q8IY63 956 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 DHX58Q96C10 678 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 FAM13BQ9NYF5 915 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 APBA3O96018 575 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 SLURP2P0DP57 97 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 IL1R1P14778 569 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 RASA1P20936 1047 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 BMP6P22004 513 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 NCAPHQ15003 741 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 SLC35G1Q2M3R5 365 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
TPM1-210ENST00000558264 XPO4Q9C0E2 1151 aaKnown RBP12.1□□□□□ -0.47
TPM1-210ENST00000558264 FLT1P17948 1338 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 UQCRHLA0A096LP55 91 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 LDHCP07864 332 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 UQCRHP07919 91 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 MCM7P33993 719 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms