RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 KCNQ2O43526 872 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 HSD3B2P26439 372 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 MAP4P27816 1152 aaKnown RBP2.65□□□□□ -1.99
HIF1A-212ENST00000557538 RASSF7Q02833 373 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 PAOXQ6QHF9 649 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 THAP5Q7Z6K1 395 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 FAM178BQ8IXR5 827 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 TMEM192Q8IY95 271 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 CPLX3Q8WVH0 158 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 CORINQ9Y5Q5 1042 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 SNX11Q9Y5W9 270 aa2.65□□□□□ -1.99
HIF1A-212ENST00000557538 C1QTNF9BB2RNN3 333 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 FAM229AH3BQW9 127 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 CYP7A1P22680 504 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 MCM4P33991 863 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 IREB2P48200 963 aaKnown RBP2.64□□□□□ -1.99
HIF1A-212ENST00000557538 CYP27A1Q02318 531 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 GRB10Q13322 594 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 GRIK4Q16099 956 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 PLEKHG4Q58EX7 1191 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 NKAPLQ5M9Q1 402 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 NBPF12Q5TAG4 269 aaPredicted RBP2.64□□□□□ -1.99
HIF1A-212ENST00000557538 SHISA2Q6UWI4 295 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 GK5Q6ZS86 529 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 FAM13CQ8NE31 585 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 SYTL5Q8TDW5 730 aaPredicted RBP2.64□□□□□ -1.99
HIF1A-212ENST00000557538 PRDM10Q9NQV6 1147 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 F6X3S4 739 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 K7ELQ4 463 aaPredicted RBP2.64□□□□□ -1.99
HIF1A-212ENST00000557538 PDPK1O15530 556 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 SLITRK5O94991 958 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 GTF2F1P35269 517 aaKnown RBP eCLIP2.64□□□□□ -1.99
HIF1A-212ENST00000557538 SLC7A5Q01650 507 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 RNF43Q68DV7 783 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 CDC37L1Q7L3B6 337 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 ARMCX6Q7L4S7 300 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 ZAR1Q86SH2 424 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 HNRNPLLQ8WVV9 542 aaKnown RBP2.64□□□□□ -1.99
HIF1A-212ENST00000557538 MRFAP1L1Q96HT8 127 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 MRGPRX3Q96LB0 322 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 KREMEN1Q96MU8 473 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 TMEM260Q9NX78 707 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 SNTG2Q9NY99 539 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 FHOD1Q9Y613 1164 aa2.64□□□□□ -1.99
HIF1A-212ENST00000557538 ANKRD34BA5PLL1 514 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 IQCA1LA6NCM1 817 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 SCG5P05408 212 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 AKAP4Q5JQC9 854 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 GPAT2Q6NUI2 795 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 UBE3DQ7Z6J8 389 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 C12orf50Q8NA57 414 aaPredicted RBP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 CCDC140Q96MF4 163 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 DEPDC7Q96QD5 511 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 SLC26A8Q96RN1 970 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 PIF1Q9H611 641 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 PIDD1Q9HB75 910 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 DIS3Q9Y2L1 958 aaKnown RBP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 GJB6O95452 261 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 ENDOUP21128 410 aaKnown RBP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 CHRNA4P43681 627 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 ETF1P62495 437 aaKnown RBP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 NKG7Q16617 165 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 C2orf27AQ580R0 203 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 ARSHQ5FYA8 562 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 EEPD1Q7L9B9 569 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 DYMQ7RTS9 669 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 THAP3Q8WTV1 239 aaPredicted RBP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 DUSP23Q9BVJ7 150 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 ANTXR1Q9H6X2 564 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 USP35Q9P2H5 1018 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 FAM95CA0A1B0GW59 222 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 GRIN3BO60391 1043 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 PROCP04070 461 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 NBPF9Q3BBW0 867 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 PRAMEF13Q5VWM6 474 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 EGFLAMQ63HQ2 1017 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 PPFIBP1Q86W92 1011 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 C7orf61Q8IZ16 206 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 ARHGEF39Q8N4T4 335 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 CELF2-AS1Q8N7Q2 184 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 RNPC3Q96LT9 517 aaKnown RBP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 DBNDD2Q9BQY9 259 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 ZC3H12CQ9C0D7 883 aaKnown RBP2.63□□□□□ -1.99
HIF1A-212ENST00000557538 KLHL25Q9H0H3 589 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 GTF2IRD1Q9UHL9 959 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 ZMYM5Q9UJ78 669 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 EMC9Q9Y3B6 208 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 CAPN6Q9Y6Q1 641 aa2.63□□□□□ -1.99
HIF1A-212ENST00000557538 SHOXO15266 292 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 PRNPP04156 253 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 FGFR1P11362 822 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 CDC25BP30305 580 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 GATA4P43694 442 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 SGO2Q562F6 1265 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 LETMD1Q6P1Q0 360 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 AGGF1Q8N302 714 aaeCLIP2.62□□□□□ -1.99
HIF1A-212ENST00000557538 TMEM151AQ8N4L1 468 aa2.62□□□□□ -1.99
HIF1A-212ENST00000557538 METTL22Q9BUU2 404 aaPredicted RBP2.62□□□□□ -1.99
HIF1A-212ENST00000557538 C7orf69Q9H7B7 122 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms