RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 HAUS7Q99871 368 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 LRRCC1Q9C099 1032 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 EMILIN3Q9NT22 766 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 GJD2Q9UKL4 321 aa10.89□□□□□ -0.67
AC004828.1-201ENST00000555303 VCAM1P19320 739 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 ADD2P35612 726 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 PLCD1P51178 756 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 CCNA1P78396 465 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 RAB3GAP1Q15042 981 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 SHROOM1Q2M3G4 852 aaPredicted RBP10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 HABP4Q5JVS0 413 aaKnown RBP10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 DDRGK1Q96HY6 314 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 NUDT12Q9BQG2 462 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 CRISPLD2Q9H0B8 497 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 DCP1AQ9NPI6 582 aaPredicted RBP10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 MCM9Q9NXL9 1143 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 FRMPD3Q5JV73 1810 aa10.88□□□□□ -0.67
AC004828.1-201ENST00000555303 RPTORQ8N122 1335 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 UBE3CQ15386 1083 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 CCAR1Q8IX12 1150 aaKnown RBP10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 LCORLQ8N3X6 602 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 GPATCH3Q96I76 525 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 DEFB118Q96PH6 123 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 SH2D4AQ9H788 454 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 TXNRD2Q9NNW7 524 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 RBPJLQ9UBG7 517 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 NR2E3Q9Y5X4 410 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 RLFQ13129 1914 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 ALPK3Q96L96 1907 aa10.87□□□□□ -0.67
AC004828.1-201ENST00000555303 GREB1LQ9C091 1923 aaPredicted RBP10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 MBD4O95243 580 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 RGS2P41220 211 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 MAP3K21Q5TCX8 1036 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 CATSPERGQ6ZRH7 1159 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 PLEKHH3Q7Z736 793 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 SDR42E1Q8WUS8 393 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 DPF3Q92784 378 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 APBA2Q99767 749 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 PAGR1Q9BTK6 254 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 BOLA2Q9H3K6 86 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 ARMT1Q9H993 441 aa10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 HMX1Q9NP08 348 aaPredicted RBP10.86□□□□□ -0.67
AC004828.1-201ENST00000555303 H0YGN5 161 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 MPHOSPH10O00566 681 aaKnown RBP10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 ZKSCAN1P17029 563 aaPredicted RBP10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 GUCY1A2P33402 732 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 SEPT2Q15019 361 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 ZYXQ15942 572 aaKnown RBP10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 MORN1Q5T089 497 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 C20orf194Q5TEA3 1177 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 TRIB2Q92519 343 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 LPAR1Q92633 364 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 USP6NLQ92738 828 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 EDC3Q96F86 508 aaKnown RBP10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 CCDC17Q96LX7 622 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 ARHGEF10LQ9HCE6 1279 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 CWC22Q9HCG8 908 aaKnown RBP10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 ECHDC1Q9NTX5 307 aa10.85□□□□□ -0.67
AC004828.1-201ENST00000555303 TRIOBPQ9H2D6 2365 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 LRRFIP1Q32MZ4 808 aaKnown RBP10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 C16orf86Q6ZW13 317 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 NECAB2Q7Z6G3 386 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 MB21D1Q8N884 522 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 ACER1Q8TDN7 264 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 PORCNQ9H237 461 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 RPAP3Q9H6T3 665 aaPredicted RBP10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 DCTPP1Q9H773 170 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 HOXC10Q9NYD6 342 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 IVNS1ABPQ9Y6Y0 642 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 DNAH12Q6ZR08 3092 aa10.84□□□□□ -0.67
AC004828.1-201ENST00000555303 ROBO3Q96MS0 1386 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 SLC15A5A6NIM6 579 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 CNMDO75829 334 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 ZFYP08048 801 aaPredicted RBP10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 HOXC6P09630 235 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 CYP2B6P20813 491 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 ICA1Q05084 483 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 COG2Q14746 738 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 Q3C1V9 767 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 GIMAP6Q6P9H5 292 aa10.83□□□□□ -0.68
AC004828.1-201ENST00000555303 KBTBD3Q8NAB2 608 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms