RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ANGEL1Q9UNK9 670 aaKnown RBP7.98□□□□□ -1.13
LINC00517-202ENST00000554257 CYP46A1Q9Y6A2 500 aa7.98□□□□□ -1.13
LINC00517-202ENST00000554257 TNNI2P48788 182 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 SCRN1Q12765 414 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 APOA5Q6Q788 366 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 USP48Q86UV5 1035 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 ESR2Q92731 530 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 ZNF274Q96GC6 653 aaPredicted RBP7.97□□□□□ -1.13
LINC00517-202ENST00000554257 ZKSCAN3Q9BRR0 538 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 GINM1Q9NU53 330 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 NYAP2Q9P242 653 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 MAD2L2Q9UI95 211 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 CDC27P30260 824 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 NEK4P51957 841 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 MIGA2Q7L4E1 593 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 GMCL1P1Q8NEA9 526 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 SMARCC2Q8TAQ2 1214 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 TMEM47Q9BQJ4 181 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 CTNND1O60716 968 aaKnown RBP7.97□□□□□ -1.13
LINC00517-202ENST00000554257 HLA-DOAP06340 250 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 INPP5BP32019 993 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 GTF3C6Q969F1 213 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 MTMR8Q96EF0 704 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00517-202ENST00000554257 AFG3L2Q9Y4W6 797 aa7.97□□□□□ -1.13
LINC00517-202ENST00000554257 UNCXA6NJT0 531 aa7.96□□□□□ -1.13
LINC00517-202ENST00000554257 RANBP6O60518 1105 aaKnown RBP7.96□□□□□ -1.13
LINC00517-202ENST00000554257 GDF11O95390 407 aa7.96□□□□□ -1.13
LINC00517-202ENST00000554257 CERKLQ49MI3 558 aaPredicted RBP7.96□□□□□ -1.13
LINC00517-202ENST00000554257 MAP1SQ66K74 1059 aaPredicted RBP7.96□□□□□ -1.13
LINC00517-202ENST00000554257 TMEM179Q6ZVK1 233 aa7.96□□□□□ -1.13
LINC00517-202ENST00000554257 KRT26Q7Z3Y9 468 aa7.96□□□□□ -1.13
LINC00517-202ENST00000554257 TMX3Q96JJ7 454 aa7.96□□□□□ -1.13
LINC00517-202ENST00000554257 UPF2Q9HAU5 1272 aaKnown RBP7.96□□□□□ -1.13
LINC00517-202ENST00000554257 TMOD2Q9NZR1 351 aa7.96□□□□□ -1.13
LINC00517-202ENST00000554257 KIAA1217Q5T5P2 1943 aa7.96□□□□□ -1.13
LINC00517-202ENST00000554257 PALM3A6NDB9 673 aaPredicted RBP7.96□□□□□ -1.14
LINC00517-202ENST00000554257 PTPRAP18433 802 aa7.96□□□□□ -1.14
LINC00517-202ENST00000554257 SEPT2Q15019 361 aa7.96□□□□□ -1.14
LINC00517-202ENST00000554257 CDC37L1Q7L3B6 337 aa7.96□□□□□ -1.14
LINC00517-202ENST00000554257 STK11IPQ8N1F8 1099 aa7.96□□□□□ -1.14
LINC00517-202ENST00000554257 LARP6Q9BRS8 491 aaKnown RBP7.96□□□□□ -1.14
LINC00517-202ENST00000554257 WDR18Q9BV38 432 aa7.96□□□□□ -1.14
LINC00517-202ENST00000554257 ZNF341Q9BYN7 854 aa7.96□□□□□ -1.14
LINC00517-202ENST00000554257 FDPSP14324 419 aaKnown RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 VGLL4Q14135 290 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 GRM4Q14833 912 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 SH3D19Q5HYK7 790 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 MOB2Q70IA6 237 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 SCYL3Q8IZE3 742 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 BRF1Q92994 677 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 DCPSQ96C86 337 aaKnown RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 C12orf42Q96LP6 360 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 FRMPD3Q5JV73 1810 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 CNTNAP5Q8WYK1 1306 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 K7ELQ4 463 aaPredicted RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 GH2P01242 217 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 EEF2P13639 858 aaKnown RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 ECE1P42892 770 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 ABCB5Q2M3G0 1257 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 CHADLQ6NUI6 762 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 LIMCH1Q9UPQ0 1083 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 TMX2Q9Y320 296 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 BAZ2BQ9UIF8 2168 aaKnown RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 FAM155AB1AL88 458 aaPredicted RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 CYTH3O43739 400 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 DDAH1O94760 285 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 SLC3A2P08195 630 aaKnown RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 ZNF654Q8IZM8 581 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 ACER1Q8TDN7 264 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 ZKSCAN4Q969J2 545 aaPredicted RBP7.95□□□□□ -1.14
LINC00517-202ENST00000554257 DDRGK1Q96HY6 314 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 KCNH4Q9UQ05 1017 aa7.95□□□□□ -1.14
LINC00517-202ENST00000554257 PDHBP11177 359 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 DGKZQ13574 1117 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 ZNF784Q8NCA9 323 aaPredicted RBP7.94□□□□□ -1.14
LINC00517-202ENST00000554257 NSUN7Q8NE18 718 aaKnown RBP7.94□□□□□ -1.14
LINC00517-202ENST00000554257 HTTP42858 3142 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 PCNTO95613 3336 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 TTLL1O95922 423 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 TSPY3P0CV98 308 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 TSPY8P0CW00 308 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 TMEM67Q5HYA8 995 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 BTNL9Q6UXG8 535 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 RBM46Q8TBY0 533 aaKnown RBP7.94□□□□□ -1.14
LINC00517-202ENST00000554257 CNKSR2Q8WXI2 1034 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 GMCL1Q96IK5 515 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 UBE2Q2LH0YL09 131 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 PLA2G6O60733 806 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 MCM2P49736 904 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 PKN1Q16512 942 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 CCDC84Q86UT8 332 aaPredicted RBP7.94□□□□□ -1.14
LINC00517-202ENST00000554257 MYL10Q9BUA6 226 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 EMILIN3Q9NT22 766 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 ADAMTS5Q9UNA0 930 aa7.94□□□□□ -1.14
LINC00517-202ENST00000554257 STK36Q9NRP7 1315 aa7.93□□□□□ -1.14
LINC00517-202ENST00000554257 SPDYE5A6NIY4 337 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms