RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 CRNKL1Q9BZJ0 848 aaKnown RBP20.9■□□□□ 0.94
SEC23A-206ENST00000553970 POLR3DP05423 398 aaPredicted RBP20.89■□□□□ 0.93
SEC23A-206ENST00000553970 RLBP1P12271 317 aa20.89■□□□□ 0.93
SEC23A-206ENST00000553970 CLASRPQ8N2M8 674 aaKnown RBP20.89■□□□□ 0.93
SEC23A-206ENST00000553970 CHMP4BQ9H444 224 aaKnown RBP20.89■□□□□ 0.93
SEC23A-206ENST00000553970 EXOC6BQ9Y2D4 811 aa20.89■□□□□ 0.93
SEC23A-206ENST00000553970 IVNS1ABPQ9Y6Y0 642 aa20.89■□□□□ 0.93
SEC23A-206ENST00000553970 PLXNB2O15031 1838 aa20.89■□□□□ 0.93
SEC23A-206ENST00000553970 MAGEB6P1A0A0J9YX57 407 aa20.88■□□□□ 0.93
SEC23A-206ENST00000553970 BMP8BP34820 402 aa20.88■□□□□ 0.93
SEC23A-206ENST00000553970 MORN1Q5T089 497 aa20.88■□□□□ 0.93
SEC23A-206ENST00000553970 LBX2Q6XYB7 198 aa20.88■□□□□ 0.93
SEC23A-206ENST00000553970 DIS3LQ8TF46 1054 aaKnown RBP20.88■□□□□ 0.93
SEC23A-206ENST00000553970 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.88■□□□□ 0.93
SEC23A-206ENST00000553970 USP6NLQ92738 828 aa20.88■□□□□ 0.93
SEC23A-206ENST00000553970 TRIM32Q13049 653 aa20.87■□□□□ 0.93
SEC23A-206ENST00000553970 MFSD14CQ5VZR4 134 aa20.87■□□□□ 0.93
SEC23A-206ENST00000553970 CATSPERGQ6ZRH7 1159 aa20.87■□□□□ 0.93
SEC23A-206ENST00000553970 C7orf61Q8IZ16 206 aa20.87■□□□□ 0.93
SEC23A-206ENST00000553970 KIF1BPQ96EK5 621 aa20.87■□□□□ 0.93
SEC23A-206ENST00000553970 PORCNQ9H237 461 aa20.87■□□□□ 0.93
SEC23A-206ENST00000553970 ZBED9Q6R2W3 1325 aa20.86■□□□□ 0.93
SEC23A-206ENST00000553970 VCAM1P19320 739 aa20.86■□□□□ 0.93
SEC23A-206ENST00000553970 MAP2K5Q13163 448 aa20.86■□□□□ 0.93
SEC23A-206ENST00000553970 ZYXQ15942 572 aaKnown RBP20.86■□□□□ 0.93
SEC23A-206ENST00000553970 SHROOM1Q2M3G4 852 aaPredicted RBP20.86■□□□□ 0.93
SEC23A-206ENST00000553970 SLC9C2Q5TAH2 1124 aa20.86■□□□□ 0.93
SEC23A-206ENST00000553970 RPAP2Q8IXW5 612 aaPredicted RBP20.86■□□□□ 0.93
SEC23A-206ENST00000553970 RHPN1Q8TCX5 695 aa20.86■□□□□ 0.93
SEC23A-206ENST00000553970 RIOK1Q9BRS2 568 aaKnown RBP20.86■□□□□ 0.93
SEC23A-206ENST00000553970 ANTXR1Q9H6X2 564 aa20.86■□□□□ 0.93
SEC23A-206ENST00000553970 LAMA3Q16787 3333 aa20.86■□□□□ 0.93
SEC23A-206ENST00000553970 DDX60LQ5H9U9 1706 aaKnown RBP20.85■□□□□ 0.93
SEC23A-206ENST00000553970 SLC15A5A6NIM6 579 aa20.85■□□□□ 0.93
SEC23A-206ENST00000553970 MSCO60682 206 aa20.85■□□□□ 0.93
SEC23A-206ENST00000553970 IFIT2P09913 472 aaKnown RBP20.85■□□□□ 0.93
SEC23A-206ENST00000553970 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
SEC23A-206ENST00000553970 Q3C1V9 767 aa20.85■□□□□ 0.93
SEC23A-206ENST00000553970 EDC3Q96F86 508 aaKnown RBP20.85■□□□□ 0.93
SEC23A-206ENST00000553970 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
SEC23A-206ENST00000553970 WDR78Q5VTH9 848 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 GPR153Q6NV75 609 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 GDF15Q99988 308 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 MCM9Q9NXL9 1143 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 HOXC10Q9NYD6 342 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 SWAP70Q9UH65 585 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 DDX19BQ9UMR2 479 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 NDUFB9Q9Y6M9 179 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 ALPK3Q96L96 1907 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 NAV1Q8NEY1 1877 aa20.84■□□□□ 0.93
SEC23A-206ENST00000553970 RAB11FIP3O75154 756 aa20.83■□□□□ 0.93
SEC23A-206ENST00000553970 PDE6AP16499 860 aa20.83■□□□□ 0.93
SEC23A-206ENST00000553970 SHMT1P34896 483 aa20.83■□□□□ 0.93
SEC23A-206ENST00000553970 AMOTL1Q8IY63 956 aa20.83■□□□□ 0.93
SEC23A-206ENST00000553970 SH2D4AQ9H788 454 aa20.83■□□□□ 0.93
SEC23A-206ENST00000553970 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
SEC23A-206ENST00000553970 HOXC6P09630 235 aa20.82■□□□□ 0.92
SEC23A-206ENST00000553970 PTPREP23469 700 aa20.82■□□□□ 0.92
SEC23A-206ENST00000553970 MNX1P50219 401 aaPredicted RBP20.82■□□□□ 0.92
SEC23A-206ENST00000553970 PLCD1P51178 756 aa20.82■□□□□ 0.92
SEC23A-206ENST00000553970 GABPAQ06546 454 aa20.82■□□□□ 0.92
SEC23A-206ENST00000553970 PANK1Q8TE04 598 aa20.82■□□□□ 0.92
SEC23A-206ENST00000553970 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
SEC23A-206ENST00000553970 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.82■□□□□ 0.929e-8■■■□□ 17.1
SEC23A-206ENST00000553970 RPAP3Q9H6T3 665 aaPredicted RBP20.82■□□□□ 0.92
SEC23A-206ENST00000553970 MPHOSPH10O00566 681 aaKnown RBP20.81■□□□□ 0.92
SEC23A-206ENST00000553970 STRNO43815 780 aa20.81■□□□□ 0.92
SEC23A-206ENST00000553970 PEX10O60683 326 aa20.81■□□□□ 0.92
SEC23A-206ENST00000553970 ATP2B2Q01814 1243 aa20.81■□□□□ 0.92
SEC23A-206ENST00000553970 TMEM179Q6ZVK1 233 aa20.81■□□□□ 0.92
SEC23A-206ENST00000553970 MB21D1Q8N884 522 aa20.81■□□□□ 0.92
SEC23A-206ENST00000553970 LPAR1Q92633 364 aa20.81■□□□□ 0.92
SEC23A-206ENST00000553970 DNAJC2Q99543 621 aaKnown RBP20.81■□□□□ 0.92
SEC23A-206ENST00000553970 SLC5A4Q9NY91 659 aa20.81■□□□□ 0.92
SEC23A-206ENST00000553970 ZMYND8Q9ULU4 1186 aaPredicted RBP20.81■□□□□ 0.92
SEC23A-206ENST00000553970 ZNF532Q9HCE3 1301 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 SPDYE16A6NNV3 312 aaPredicted RBP20.8■□□□□ 0.92
SEC23A-206ENST00000553970 GOLIM4O00461 696 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 CNMDO75829 334 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 COL6A1P12109 1028 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 GRB14Q14449 540 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 COG2Q14746 738 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 CCL14Q16627 93 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 ACER1Q8TDN7 264 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 ATP8A2Q9NTI2 1148 aa20.8■□□□□ 0.92
SEC23A-206ENST00000553970 PFASO15067 1338 aa20.79■□□□□ 0.92
SEC23A-206ENST00000553970 CCND3P30281 292 aaPredicted RBP20.79■□□□□ 0.92
SEC23A-206ENST00000553970 SEPT2Q15019 361 aa20.79■□□□□ 0.92
SEC23A-206ENST00000553970 LHX8Q68G74 356 aa20.79■□□□□ 0.92
SEC23A-206ENST00000553970 TANGO6Q9C0B7 1094 aa20.79■□□□□ 0.92
SEC23A-206ENST00000553970 ARHGEF10LQ9HCE6 1279 aa20.79■□□□□ 0.92
SEC23A-206ENST00000553970 DCP1AQ9NPI6 582 aaPredicted RBP20.79■□□□□ 0.92
SEC23A-206ENST00000553970 POTEEQ6S8J3 1075 aa20.78■□□□□ 0.92
SEC23A-206ENST00000553970 TDHQ8IZJ6 230 aa20.78■□□□□ 0.92
SEC23A-206ENST00000553970 SHCBP1Q8NEM2 672 aa20.78■□□□□ 0.92
SEC23A-206ENST00000553970 CCDC17Q96LX7 622 aa20.78■□□□□ 0.92
SEC23A-206ENST00000553970 PAG1Q9NWQ8 432 aa20.78■□□□□ 0.92
SEC23A-206ENST00000553970 GUCY1A2P33402 732 aa20.77■□□□□ 0.92
SEC23A-206ENST00000553970 MAGEA10P43363 369 aaPredicted RBP20.77■□□□□ 0.92
SEC23A-206ENST00000553970 LRIT3Q3SXY7 679 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms