RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PNMA1Q8ND90 353 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 PLIN4Q96Q06 1357 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 UTRNP46939 3433 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 PLEKHA8P1O95397 391 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 PRELPP51888 382 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 GSE1Q14687 1217 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 CIAPIN1Q6FI81 312 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 TMTC3Q6ZXV5 915 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 TRIM22Q8IYM9 498 aa22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 GZF1Q9H116 711 aaPredicted RBP22.73■■□□□ 1.23
RBFOX1-215ENST00000553186 GADD45BO75293 160 aaPredicted RBP22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 MAP3K14Q99558 947 aa22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 TMEM47Q9BQJ4 181 aa22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 RNF26Q9BY78 433 aaPredicted RBP22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 DNAJC18Q9H819 358 aa22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 STX8Q9UNK0 236 aa22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 ENTPD3O75355 529 aa22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 RASSF7Q02833 373 aa22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 CTCFLQ8NI51 663 aaPredicted RBP22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 CEP95Q96GE4 821 aa22.72■■□□□ 1.23
RBFOX1-215ENST00000553186 DEXIO95424 95 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 SLURP2P0DP57 97 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 AKR1B1P15121 316 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 DLGAP5Q15398 846 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 KRT40Q6A162 431 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 WASF1Q92558 559 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 TFIP11Q9UBB9 837 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 PI4KBQ9UBF8 816 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 ATRNL1Q5VV63 1379 aa22.71■■□□□ 1.23
RBFOX1-215ENST00000553186 MTMR14Q8NCE2 650 aa22.7■■□□□ 1.23
RBFOX1-215ENST00000553186 IGKV6D-41A0A0C4DH26 115 aa22.7■■□□□ 1.22
RBFOX1-215ENST00000553186 CSPP1Q1MSJ5 1256 aa22.7■■□□□ 1.22
RBFOX1-215ENST00000553186 SRBD1Q8N5C6 995 aaKnown RBP22.7■■□□□ 1.22
RBFOX1-215ENST00000553186 KIF23Q02241 960 aaPredicted RBP22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 SCAND2PQ9GZW5 306 aaPredicted RBP22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 ELP1O95163 1332 aa22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 KIF28PB7ZC32 967 aa22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 PRPF3O43395 683 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 MBD3O95983 291 aa22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 TNIP1Q15025 636 aa22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 PKN1Q16512 942 aa22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 METTL16Q86W50 562 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 ZBED3Q96IU2 234 aaPredicted RBP22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 MTMR4Q9NYA4 1195 aa22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 ZNF70Q9UC06 446 aaPredicted RBP22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 TAOK2Q9UL54 1235 aa22.69■■□□□ 1.22
RBFOX1-215ENST00000553186 CNTNAP5Q8WYK1 1306 aa22.68■■□□□ 1.22
RBFOX1-215ENST00000553186 COL2A1P02458 1487 aaPredicted RBP22.68■■□□□ 1.22
RBFOX1-215ENST00000553186 KIF5BP33176 963 aa22.68■■□□□ 1.22
RBFOX1-215ENST00000553186 GRM4Q14833 912 aa22.68■■□□□ 1.22
RBFOX1-215ENST00000553186 ZSCAN29Q8IWY8 852 aaPredicted RBP22.68■■□□□ 1.22
RBFOX1-215ENST00000553186 SIPA1L1O43166 1804 aa22.68■■□□□ 1.22
RBFOX1-215ENST00000553186 UBE2HP62256 183 aa22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 SPDYE2Q495Y8 402 aa22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 V9GY48 417 aaPredicted RBP22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 SRCAPQ6ZRS2 3230 aa22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 CLRN2A0PK11 232 aa22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 FZD9O00144 591 aa22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 TOP1P11387 765 aaKnown RBP22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 FOXP4Q8IVH2 680 aaPredicted RBP22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 LEO1Q8WVC0 666 aaPredicted RBP22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 MAD2L2Q9UI95 211 aa22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 ARFGEF1Q9Y6D6 1849 aa22.67■■□□□ 1.22
RBFOX1-215ENST00000553186 TRIM29Q14134 588 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 ATL3Q6DD88 541 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 BRAPQ7Z569 592 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 STAG2Q8N3U4 1231 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 TMOD2Q9NZR1 351 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 CFAP45Q9UL16 551 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 FAM196BA6NMK8 535 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 CAVIN1Q6NZI2 390 aaKnown RBP22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 TATDN1Q6P1N9 297 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 SHISA4Q96DD7 197 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 SPATA32Q96LK8 384 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 CCDC17Q96LX7 622 aa22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 FHDC1Q9C0D6 1143 aaPredicted RBP22.66■■□□□ 1.22
RBFOX1-215ENST00000553186 SHTN1A0MZ66 631 aa22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 TCP10L2B9ZVM9 353 aa22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 AKAP17AQ02040 695 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 USP28Q96RU2 1077 aa22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 hCG_1642624A0A1W2PR95 340 aa22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 PALM3A6NDB9 673 aaPredicted RBP22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 MMP1P03956 469 aa22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 RPS12P25398 132 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 U2AF2P26368 475 aaKnown RBP eCLIP22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 ZNF280AP59817 542 aaPredicted RBP22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 FKBP1CQ5VVH2 108 aa22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 FTOQ9C0B1 505 aaKnown RBP eCLIP22.65■■□□□ 1.22
RBFOX1-215ENST00000553186 CNTNAP1P78357 1384 aa22.64■■□□□ 1.21
RBFOX1-215ENST00000553186 WNT10BO00744 389 aa22.64■■□□□ 1.21
RBFOX1-215ENST00000553186 CLEC10AQ8IUN9 316 aa22.64■■□□□ 1.21
RBFOX1-215ENST00000553186 MYOZ2Q9NPC6 264 aa22.64■■□□□ 1.21
RBFOX1-215ENST00000553186 GNAQP50148 359 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 MMP14P50281 582 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 SLC35G1Q2M3R5 365 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 MYSM1Q5VVJ2 828 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 RASGRP2Q7LDG7 609 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 FAM151AQ8WW52 585 aa22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 ZNF396Q96N95 335 aaPredicted RBP22.63■■□□□ 1.21
RBFOX1-215ENST00000553186 CSRNP1Q96S65 589 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms