RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CALM3P0DP25 149 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 MYSM1Q5VVJ2 828 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 STAG2Q8N3U4 1231 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 NEDD1Q8NHV4 660 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 RCOR1Q9UKL0 485 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 VEGFAP15692 232 aaPredicted RBP22.84■■□□□ 1.25
SSH1-209ENST00000551165 PPP2R5BQ15173 497 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 PIBF1Q8WXW3 757 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 CEP95Q96GE4 821 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 PRMT6Q96LA8 375 aaPredicted RBP22.84■■□□□ 1.25
SSH1-209ENST00000551165 TDRD3Q9H7E2 651 aaKnown RBP22.84■■□□□ 1.25
SSH1-209ENST00000551165 SERPINA10Q9UK55 444 aa22.84■■□□□ 1.25
SSH1-209ENST00000551165 XRCC6P12956 609 aaKnown RBP eCLIP22.83■■□□□ 1.25
SSH1-209ENST00000551165 HDLBPQ00341 1268 aaKnown RBP22.83■■□□□ 1.25
SSH1-209ENST00000551165 CFAP100Q494V2 611 aa22.83■■□□□ 1.25
SSH1-209ENST00000551165 GRIPAP1Q4V328 841 aa22.83■■□□□ 1.25
SSH1-209ENST00000551165 CLEC10AQ8IUN9 316 aa22.83■■□□□ 1.25
SSH1-209ENST00000551165 CTCFLQ8NI51 663 aaPredicted RBP22.83■■□□□ 1.25
SSH1-209ENST00000551165 RNF26Q9BY78 433 aaPredicted RBP22.83■■□□□ 1.25
SSH1-209ENST00000551165 ZNF287Q9HBT7 754 aa22.83■■□□□ 1.25
SSH1-209ENST00000551165 RBM28Q9NW13 759 aaKnown RBP22.83■■□□□ 1.25
SSH1-209ENST00000551165 CNTNAP5Q8WYK1 1306 aa22.83■■□□□ 1.24
SSH1-209ENST00000551165 MYH6P13533 1939 aa22.83■■□□□ 1.24
SSH1-209ENST00000551165 FAM196BA6NMK8 535 aa22.83■■□□□ 1.24
SSH1-209ENST00000551165 AKR1B1P15121 316 aa22.83■■□□□ 1.24
SSH1-209ENST00000551165 TRIM29Q14134 588 aa22.83■■□□□ 1.24
SSH1-209ENST00000551165 DALRD3Q5D0E6 543 aaKnown RBP22.83■■□□□ 1.24
SSH1-209ENST00000551165 SH3BP5LQ7L8J4 393 aa22.83■■□□□ 1.24
SSH1-209ENST00000551165 ZNF396Q96N95 335 aaPredicted RBP22.83■■□□□ 1.24
SSH1-209ENST00000551165 DDTLA6NHG4 134 aaPredicted RBP22.82■■□□□ 1.24
SSH1-209ENST00000551165 BTBD18B2RXH4 712 aa22.82■■□□□ 1.24
SSH1-209ENST00000551165 VPS54Q9P1Q0 977 aa22.82■■□□□ 1.24
SSH1-209ENST00000551165 SERPINB13Q9UIV8 391 aa22.82■■□□□ 1.24
SSH1-209ENST00000551165 RSBN1LQ6PCB5 846 aaPredicted RBP22.82■■□□□ 1.24
SSH1-209ENST00000551165 BRAPQ7Z569 592 aa22.82■■□□□ 1.24
SSH1-209ENST00000551165 WASF1Q92558 559 aa22.82■■□□□ 1.24
SSH1-209ENST00000551165 PRPF3O43395 683 aaKnown RBP22.81■■□□□ 1.24
SSH1-209ENST00000551165 MMP1P03956 469 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 SHMT1P34896 483 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 SLC35G1Q2M3R5 365 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 OXER1Q8TDS5 423 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 PSME4Q14997 1843 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 U2AF2P26368 475 aaKnown RBP eCLIP22.81■■□□□ 1.24
SSH1-209ENST00000551165 PANK2Q9BZ23 570 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 DNAJC18Q9H819 358 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 GRPEL1Q9HAV7 217 aa22.81■■□□□ 1.24
SSH1-209ENST00000551165 BRCA1P38398 1863 aaKnown RBP22.8■■□□□ 1.24
SSH1-209ENST00000551165 VIL1P09327 827 aaKnown RBP22.8■■□□□ 1.24
SSH1-209ENST00000551165 PTGER2P43116 358 aa22.8■■□□□ 1.24
SSH1-209ENST00000551165 SHROOM1Q2M3G4 852 aaPredicted RBP22.8■■□□□ 1.24
SSH1-209ENST00000551165 GMLQ99445 158 aa22.8■■□□□ 1.24
SSH1-209ENST00000551165 RTEL1Q9NZ71 1219 aa22.8■■□□□ 1.24
SSH1-209ENST00000551165 MAD2L2Q9UI95 211 aa22.8■■□□□ 1.24
SSH1-209ENST00000551165 GOLGA6L4A6NEF3 574 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 GOLGA8HP0CJ92 632 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 NT5C2P49902 561 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 EIF6P56537 245 aaKnown RBP22.79■■□□□ 1.24
SSH1-209ENST00000551165 NR5A1Q13285 461 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 DIS3L2Q8IYB7 885 aaKnown RBP22.79■■□□□ 1.24
SSH1-209ENST00000551165 RGS22Q8NE09 1264 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 IDI2Q9BXS1 227 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 AKAP17AQ02040 695 aaKnown RBP22.79■■□□□ 1.24
SSH1-209ENST00000551165 GNL2Q13823 731 aaKnown RBP22.79■■□□□ 1.24
SSH1-209ENST00000551165 CCDC183Q5T5S1 534 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 CPVLQ9H3G5 476 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 SIPA1L1O43166 1804 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 SRCAPQ6ZRS2 3230 aa22.79■■□□□ 1.24
SSH1-209ENST00000551165 NFKBIEO00221 500 aa22.78■■□□□ 1.24
SSH1-209ENST00000551165 GRM4Q14833 912 aa22.78■■□□□ 1.24
SSH1-209ENST00000551165 ATL3Q6DD88 541 aa22.78■■□□□ 1.24
SSH1-209ENST00000551165 LINC00301Q8NCQ3 95 aa22.78■■□□□ 1.24
SSH1-209ENST00000551165 SYAP1Q96A49 352 aaPredicted RBP22.78■■□□□ 1.24
SSH1-209ENST00000551165 LRSAM1Q6UWE0 723 aa22.78■■□□□ 1.24
SSH1-209ENST00000551165 BICD2Q8TD16 824 aa22.78■■□□□ 1.24
SSH1-209ENST00000551165 ZNRF3Q9ULT6 936 aa22.78■■□□□ 1.24
SSH1-209ENST00000551165 CCDC178Q5BJE1 867 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 NIM1KQ8IY84 436 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 DACT1Q9NYF0 836 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 BCS1LQ9Y276 419 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 NR1I2O75469 434 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 CXCL9Q07325 125 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 ZSCAN29Q8IWY8 852 aaPredicted RBP22.77■■□□□ 1.24
SSH1-209ENST00000551165 RBSNQ9H1K0 784 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 POLR3EQ9NVU0 708 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 PCDHA7Q9UN72 937 aa22.77■■□□□ 1.24
SSH1-209ENST00000551165 MYH8P13535 1937 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 ADAMTS3O15072 1205 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 CYTH3O43739 400 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 HLA-DOAP06340 250 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 KIF5BP33176 963 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 ME1P48163 572 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 NOVP48745 357 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 L1TD1Q5T7N2 865 aaKnown RBP22.76■■□□□ 1.23
SSH1-209ENST00000551165 SOGA3Q5TF21 947 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 ANO1Q5XXA6 986 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 GOLPH3LQ9H4A5 285 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 MTMR4Q9NYA4 1195 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 IGKV6D-41A0A0C4DH26 115 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 CLRN2A0PK11 232 aa22.76■■□□□ 1.23
SSH1-209ENST00000551165 NASPP49321 788 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms