RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 COL5A2P05997 1499 aaPredicted RBP11.72□□□□□ -0.53
ERBB3-214ENST00000550070 A0A0U1RQJ8 604 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 A0A1B0GTH6 734 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 PLCD1P51178 756 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 APTXQ7Z2E3 356 aaKnown RBP11.72□□□□□ -0.53
ERBB3-214ENST00000550070 ATRIPQ8WXE1 791 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 TOMM22Q9NS69 142 aa11.72□□□□□ -0.53
ERBB3-214ENST00000550070 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
ERBB3-214ENST00000550070 A0A087X0B3 334 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 DEXIO95424 95 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 POLD1P28340 1107 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 WTAPQ15007 396 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 CCDC12Q8WUD4 166 aaPredicted RBP11.71□□□□□ -0.53
ERBB3-214ENST00000550070 PIGBQ92521 554 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 LPIN2Q92539 896 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 SHISA4Q96DD7 197 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 TIAM2Q8IVF5 1701 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 DCCP43146 1447 aa11.71□□□□□ -0.53
ERBB3-214ENST00000550070 FAM205CA6NFA0 338 aa11.71□□□□□ -0.54
ERBB3-214ENST00000550070 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.54
ERBB3-214ENST00000550070 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.54
ERBB3-214ENST00000550070 ERCC5P28715 1186 aaPredicted RBP11.71□□□□□ -0.54
ERBB3-214ENST00000550070 CASP1P29466 404 aa11.71□□□□□ -0.54
ERBB3-214ENST00000550070 PUM3Q15397 648 aaKnown RBP11.71□□□□□ -0.54
ERBB3-214ENST00000550070 KANK3Q6NY19 840 aa11.71□□□□□ -0.54
ERBB3-214ENST00000550070 RAD9BQ6WBX8 426 aa11.71□□□□□ -0.54
ERBB3-214ENST00000550070 STAG1Q8WVM7 1258 aa11.71□□□□□ -0.54
ERBB3-214ENST00000550070 CCDC34Q96HJ3 373 aa11.71□□□□□ -0.54
ERBB3-214ENST00000550070 DOCK2Q92608 1830 aa11.71□□□□□ -0.54
ERBB3-214ENST00000550070 PDE8AO60658 829 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 STARD3NLO95772 234 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 RBL2Q08999 1139 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 NUP133Q8WUM0 1156 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 RABGGTAQ92696 567 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 PANX2Q96RD6 677 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 LZTFL1Q9NQ48 299 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 STRN4Q9NRL3 753 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 GEMIN8Q9NWZ8 242 aaKnown RBP11.7□□□□□ -0.54
ERBB3-214ENST00000550070 CCDC175P0C221 793 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 OAS2P29728 719 aaKnown RBP11.7□□□□□ -0.54
ERBB3-214ENST00000550070 AFMP43652 599 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 STX17P56962 302 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 ST5P78524 1137 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 MYBPC2Q14324 1141 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 CPLX3Q8WVH0 158 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 FUT8Q9BYC5 575 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 CALCOCO1Q9P1Z2 691 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.7□□□□□ -0.54
ERBB3-214ENST00000550070 MYH6P13533 1939 aa11.7□□□□□ -0.54
ERBB3-214ENST00000550070 TDO2P48775 406 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 HNRNPH2P55795 449 aaKnown RBP11.69□□□□□ -0.54
ERBB3-214ENST00000550070 SMC1AQ14683 1233 aaKnown RBP11.69□□□□□ -0.54
ERBB3-214ENST00000550070 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
ERBB3-214ENST00000550070 KLHL10Q6JEL2 608 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 NME8Q8N427 588 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 GOLGA1Q92805 767 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 ZSWIM4Q9H7M6 989 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 ARFGAP3Q9NP61 516 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 CEP131Q9UPN4 1083 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 PBX1P40424 430 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 CUL4BQ13620 913 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 SART3Q15020 963 aaKnown RBP11.69□□□□□ -0.54
ERBB3-214ENST00000550070 SPATA1Q5VX52 437 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 ZNF654Q8IZM8 581 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 IGSF22Q8N9C0 903 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 YY1AP1Q9H869 796 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
ERBB3-214ENST00000550070 ERICH2A1L162 156 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 TXLNAP40222 546 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 SMYD4Q8IYR2 804 aaPredicted RBP11.68□□□□□ -0.54
ERBB3-214ENST00000550070 NEK11Q8NG66 645 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
ERBB3-214ENST00000550070 ADD3Q9UEY8 706 aaKnown RBP11.68□□□□□ -0.54
ERBB3-214ENST00000550070 NUP98P52948 1817 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 BCORQ6W2J9 1755 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 MROH5Q6ZUA9 1318 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 CCDC196A0A1B0GTZ2 297 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 UBAP1LF5GYI3 381 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 SMIM22K7EJ46 135 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 WNT7AO00755 349 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 SLC5A1P13866 664 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 PAGE5Q96GU1 130 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 SLC4A9Q96Q91 983 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 VPS54Q9P1Q0 977 aa11.68□□□□□ -0.54
ERBB3-214ENST00000550070 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 CDKAL1Q5VV42 579 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 PPFIBP1Q86W92 1011 aa11.67□□□□□ -0.54
ERBB3-214ENST00000550070 ZNF513Q8N8E2 541 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms