RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 RXRAP19793 462 aa13.12□□□□□ -0.31
DDB1-224ENST00000545894 ADD2P35612 726 aa13.12□□□□□ -0.31
DDB1-224ENST00000545894 IARSP41252 1262 aaKnown RBP13.12□□□□□ -0.31
DDB1-224ENST00000545894 SP8Q8IXZ3 490 aa13.12□□□□□ -0.31
DDB1-224ENST00000545894 TMEM87BQ96K49 555 aa13.12□□□□□ -0.31
DDB1-224ENST00000545894 INTS13Q9NVM9 706 aa13.12□□□□□ -0.31
DDB1-224ENST00000545894 HOOK1Q9UJC3 728 aaKnown RBP13.12□□□□□ -0.31
DDB1-224ENST00000545894 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
DDB1-224ENST00000545894 DLEC1Q9Y238 1755 aa13.12□□□□□ -0.31
DDB1-224ENST00000545894 ZBTB43O43298 467 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 CYP2C19P33261 490 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 TBX2Q13207 712 aaPredicted RBP13.11□□□□□ -0.31
DDB1-224ENST00000545894 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
DDB1-224ENST00000545894 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 C21orf2O43822 256 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 CASQ1P31415 396 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 CHRNDQ07001 517 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 PDE4BQ07343 736 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 NTRK3Q16288 839 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 KRI1Q8N9T8 703 aaKnown RBP13.11□□□□□ -0.31
DDB1-224ENST00000545894 HELBQ8NG08 1087 aaPredicted RBP13.11□□□□□ -0.31
DDB1-224ENST00000545894 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
DDB1-224ENST00000545894 GOLGA8AA7E2F4 631 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 B4E1Z4 1266 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 STX10O60499 249 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 APPP05067 770 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 BMP6P22004 513 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 MCAMP43121 646 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
DDB1-224ENST00000545894 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 SLX4Q8IY92 1834 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 STK36Q9NRP7 1315 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 WTIPA6NIX2 430 aaPredicted RBP13.1□□□□□ -0.31
DDB1-224ENST00000545894 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
DDB1-224ENST00000545894 GNG11P61952 73 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 GPSM2P81274 684 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 TTF1Q15361 905 aaPredicted RBP13.1□□□□□ -0.31
DDB1-224ENST00000545894 METTL24Q5JXM2 366 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
DDB1-224ENST00000545894 PDILTQ8N807 584 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 IGDCC4Q8TDY8 1250 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 DACH1Q9UI36 760 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 MAN1B1Q9UKM7 699 aa13.1□□□□□ -0.31
DDB1-224ENST00000545894 MROH5Q6ZUA9 1318 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 FOXN1O15353 648 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 UBE3CQ15386 1083 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 SGMS1Q86VZ5 419 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 GPR161Q8N6U8 529 aaKnown RBP13.09□□□□□ -0.31
DDB1-224ENST00000545894 VGLL2Q8N8G2 317 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 MLKLQ8NB16 471 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
DDB1-224ENST00000545894 LY9Q9HBG7 655 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
DDB1-224ENST00000545894 SNAP23O00161 211 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 ZNF18P17022 549 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 CDK11BP21127 795 aaKnown RBP13.09□□□□□ -0.31
DDB1-224ENST00000545894 SSRP1Q08945 709 aaKnown RBP13.09□□□□□ -0.31
DDB1-224ENST00000545894 POSTNQ15063 836 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 TMEM67Q5HYA8 995 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 NOSTRINQ8IVI9 506 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 TC2NQ8N9U0 490 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 ENOX1Q8TC92 643 aaKnown RBP13.09□□□□□ -0.31
DDB1-224ENST00000545894 WASF1Q92558 559 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 WDR24Q96S15 920 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 NFE2L3Q9Y4A8 694 aa13.09□□□□□ -0.31
DDB1-224ENST00000545894 SEC31AO94979 1220 aaKnown RBP13.08□□□□□ -0.32
DDB1-224ENST00000545894 PPP2R3AQ06190 1150 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 HSP90AA4PQ58FG1 418 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 NT5DC1Q5TFE4 455 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.08□□□□□ -0.32
DDB1-224ENST00000545894 MRFAP1Q9Y605 127 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
DDB1-224ENST00000545894 PDE8BO95263 885 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
DDB1-224ENST00000545894 LIFRP42702 1097 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
DDB1-224ENST00000545894 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 CC2D1AQ6P1N0 951 aaPredicted RBP13.08□□□□□ -0.32
DDB1-224ENST00000545894 TOGARAM2Q6ZUX3 1019 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 MYL10Q9BUA6 226 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 ANKRD2Q9GZV1 360 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 PIH1D3Q9NQM4 214 aaKnown RBP13.08□□□□□ -0.32
DDB1-224ENST00000545894 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.32
DDB1-224ENST00000545894 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms