RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
LIMS2-217ENST00000545738 GPHNQ9NQX3 736 aaPredicted RBP19.25■□□□□ 0.67
LIMS2-217ENST00000545738 PICK1Q9NRD5 415 aa19.25■□□□□ 0.67
LIMS2-217ENST00000545738 RNF20Q5VTR2 975 aa19.25■□□□□ 0.67
LIMS2-217ENST00000545738 SPRYD7Q5W111 196 aa19.25■□□□□ 0.67
LIMS2-217ENST00000545738 RCSD1Q6JBY9 416 aa19.25■□□□□ 0.67
LIMS2-217ENST00000545738 KIF2CQ99661 725 aa19.25■□□□□ 0.67
LIMS2-217ENST00000545738 SENP2Q9HC62 589 aa19.25■□□□□ 0.67
LIMS2-217ENST00000545738 USP17L5A8MUK1 530 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 NOVP48745 357 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 PPATQ06203 517 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 KIAA1755Q5JYT7 1200 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 RASGRP2Q7LDG7 609 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 NCOA7Q8NI08 942 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 ESR2Q92731 530 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 CABP5Q9NP86 173 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 MTMR4Q9NYA4 1195 aa19.24■□□□□ 0.67
LIMS2-217ENST00000545738 TRIM75PA6NK02 468 aa19.23■□□□□ 0.67
LIMS2-217ENST00000545738 EEF2P13639 858 aaKnown RBP19.23■□□□□ 0.67
LIMS2-217ENST00000545738 ICA1Q05084 483 aa19.23■□□□□ 0.67
LIMS2-217ENST00000545738 SPP2Q13103 211 aa19.23■□□□□ 0.67
LIMS2-217ENST00000545738 GRM1Q13255 1194 aa19.23■□□□□ 0.67
LIMS2-217ENST00000545738 LRRC2Q9BYS8 371 aa19.23■□□□□ 0.67
LIMS2-217ENST00000545738 KRT23Q9C075 422 aa19.23■□□□□ 0.67
LIMS2-217ENST00000545738 CNNM2Q9H8M5 875 aa19.23■□□□□ 0.67
LIMS2-217ENST00000545738 ZKSCAN1P17029 563 aaPredicted RBP19.22■□□□□ 0.67
LIMS2-217ENST00000545738 PPIL2Q13356 520 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 MOGSQ13724 837 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 IL17RAQ96F46 866 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 MS4A4AQ96JQ5 239 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 JAKMIP1Q96N16 626 aaKnown RBP19.22■□□□□ 0.67
LIMS2-217ENST00000545738 NEK1Q96PY6 1258 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 KCNH4Q9UQ05 1017 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 AOC2O75106 756 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 VEGFBP49765 207 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 MTMR2Q13614 643 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 SEC23AQ15436 765 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 PAXIP1Q6ZW49 1069 aaPredicted RBP19.22■□□□□ 0.67
LIMS2-217ENST00000545738 ENAHQ8N8S7 591 aaPredicted RBP19.22■□□□□ 0.67
LIMS2-217ENST00000545738 ZNF280CQ8ND82 737 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 CAPNS2Q96L46 248 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 WDR18Q9BV38 432 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 KANSL2Q9H9L4 492 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 GINM1Q9NU53 330 aa19.22■□□□□ 0.67
LIMS2-217ENST00000545738 LOC285556D6RIA3 1793 aa19.21■□□□□ 0.67
LIMS2-217ENST00000545738 TNKSO95271 1327 aa19.21■□□□□ 0.67
LIMS2-217ENST00000545738 EXOSC10Q01780 885 aaKnown RBP19.21■□□□□ 0.67
LIMS2-217ENST00000545738 TRDNQ13061 729 aa19.21■□□□□ 0.67
LIMS2-217ENST00000545738 ZYXQ15942 572 aaKnown RBP19.21■□□□□ 0.67
LIMS2-217ENST00000545738 RALYLQ86SE5 291 aaKnown RBP19.21■□□□□ 0.67
LIMS2-217ENST00000545738 C22orf23Q9BZE7 217 aa19.21■□□□□ 0.67
LIMS2-217ENST00000545738 UPF3BQ9BZI7 483 aaKnown RBP19.21■□□□□ 0.67
LIMS2-217ENST00000545738 TCP11L1Q9NUJ3 509 aa19.21■□□□□ 0.67
LIMS2-217ENST00000545738 RBM25P49756 843 aaKnown RBP19.2■□□□□ 0.66
LIMS2-217ENST00000545738 LRRC47Q8N1G4 583 aaKnown RBP19.2■□□□□ 0.66
LIMS2-217ENST00000545738 ZSCAN10Q96SZ4 725 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-217ENST00000545738 CLIP2Q9UDT6 1046 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 STX8Q9UNK0 236 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 THSD7BQ9C0I4 1608 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 PRC1O43663 620 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 ZBTB48P10074 688 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-217ENST00000545738 CASTP20810 708 aaKnown RBP19.2■□□□□ 0.66
LIMS2-217ENST00000545738 HMGCS2P54868 508 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 ATP2B2Q01814 1243 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 IGDCC4Q8TDY8 1250 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 TBC1D32Q96NH3 1257 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 EMILIN3Q9NT22 766 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 NYAP2Q9P242 653 aa19.2■□□□□ 0.66
LIMS2-217ENST00000545738 A0A0G2JLL6 359 aaPredicted RBP19.19■□□□□ 0.66
LIMS2-217ENST00000545738 MCCP23508 829 aa19.19■□□□□ 0.66
LIMS2-217ENST00000545738 BACE1P56817 501 aa19.19■□□□□ 0.66
LIMS2-217ENST00000545738 KRT32Q14532 448 aa19.19■□□□□ 0.66
LIMS2-217ENST00000545738 PRRT2Q7Z6L0 340 aaPredicted RBP19.19■□□□□ 0.66
LIMS2-217ENST00000545738 BRI3BPQ8WY22 251 aa19.19■□□□□ 0.66
LIMS2-217ENST00000545738 PTPN18Q99952 460 aa19.19■□□□□ 0.66
LIMS2-217ENST00000545738 TMEM47Q9BQJ4 181 aa19.19■□□□□ 0.66
LIMS2-217ENST00000545738 TMX2Q9Y320 296 aa19.19■□□□□ 0.66
LIMS2-217ENST00000545738 WDR33Q9C0J8 1336 aaKnown RBP19.18■□□□□ 0.66
LIMS2-217ENST00000545738 TTLL1O95922 423 aa19.18■□□□□ 0.66
LIMS2-217ENST00000545738 ANAPC15P60006 121 aa19.18■□□□□ 0.66
LIMS2-217ENST00000545738 DNAJC5GQ8N7S2 189 aa19.18■□□□□ 0.66
LIMS2-217ENST00000545738 MKL1Q969V6 931 aa19.18■□□□□ 0.66
LIMS2-217ENST00000545738 CCDC102AQ96A19 550 aa19.18■□□□□ 0.66
LIMS2-217ENST00000545738 CHMP4CQ96CF2 233 aa19.18■□□□□ 0.66
LIMS2-217ENST00000545738 ZSWIM6Q9HCJ5 1215 aa19.18■□□□□ 0.66
LIMS2-217ENST00000545738 USP17L10C9JJH3 530 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 MCM5P33992 734 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 TREML2Q5T2D2 321 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 DHX32Q7L7V1 743 aaKnown RBP19.17■□□□□ 0.66
LIMS2-217ENST00000545738 SPICE1Q8N0Z3 855 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 KIAA1683Q9H0B3 1180 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 LY9Q9HBG7 655 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 SH2B2O14492 632 aaPredicted RBP19.17■□□□□ 0.66
LIMS2-217ENST00000545738 CXCL11O14625 94 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 RPS6KB1P23443 525 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 SH3D19Q5HYK7 790 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 IQCA1Q86XH1 822 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 AS3MTQ9HBK9 375 aa19.17■□□□□ 0.66
LIMS2-217ENST00000545738 IGF2BP3O00425 579 aaKnown RBP eCLIP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms