RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SH3D19Q5HYK7 790 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 ADGRA1Q86SQ6 560 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 TGFBRAP1Q8WUH2 860 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 KIF1BPQ96EK5 621 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 AS3MTQ9HBK9 375 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 TMOD4Q9NZQ9 345 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 DOCK1Q14185 1865 aa19.71■□□□□ 0.75
DDX55-212ENST00000544738 CYP7A1P22680 504 aa19.7■□□□□ 0.74
DDX55-212ENST00000544738 HERVK_113P62684 666 aa19.7■□□□□ 0.74
DDX55-212ENST00000544738 MAP3K12Q12852 859 aa19.7■□□□□ 0.74
DDX55-212ENST00000544738 Q3C1V9 767 aa19.7■□□□□ 0.74
DDX55-212ENST00000544738 FOXP4Q8IVH2 680 aaPredicted RBP19.7■□□□□ 0.74
DDX55-212ENST00000544738 CWC22Q9HCG8 908 aaKnown RBP19.7■□□□□ 0.74
DDX55-212ENST00000544738 IL1RAPL2Q9NP60 686 aa19.7■□□□□ 0.74
DDX55-212ENST00000544738 RAB11FIP3O75154 756 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 FOSL2P15408 326 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 MTMR2Q13614 643 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 TTF1Q15361 905 aaPredicted RBP19.69■□□□□ 0.74
DDX55-212ENST00000544738 C9orf50Q5SZB4 431 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 PLEKHH3Q7Z736 793 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 MAPKAPK5Q8IW41 473 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 USP6NLQ92738 828 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 PAGR1Q9BTK6 254 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 PORCNQ9H237 461 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 RBPJLQ9UBG7 517 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 CDH23Q9H251 3354 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 FLT1P17948 1338 aa19.69■□□□□ 0.74
DDX55-212ENST00000544738 MUC3AQ02505 3323 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 PLXNB2O15031 1838 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 IFIT2P09913 472 aaKnown RBP19.68■□□□□ 0.74
DDX55-212ENST00000544738 CNGA1P29973 690 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 RTP1P59025 263 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 GPR142Q7Z601 462 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 SIRT2Q8IXJ6 389 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 CRACR2BQ8N4Y2 399 aaPredicted RBP19.68■□□□□ 0.74
DDX55-212ENST00000544738 TRIM34Q9BYJ4 488 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 TTYH1Q9H313 450 aaPredicted RBP19.68■□□□□ 0.74
DDX55-212ENST00000544738 RAPGEFL1Q9UHV5 662 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 ATP11BQ9Y2G3 1177 aa19.68■□□□□ 0.74
DDX55-212ENST00000544738 APBB1O00213 710 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 HLA-DOAP06340 250 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
DDX55-212ENST00000544738 BACE1P56817 501 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 ERVK-9P63128 1117 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 ERVK-24P63145 666 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 MORN1Q5T089 497 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 METTL16Q86W50 562 aaKnown RBP19.67■□□□□ 0.74
DDX55-212ENST00000544738 MAGEB6Q8N7X4 407 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 ANTXR1Q9H6X2 564 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 GINM1Q9NU53 330 aa19.67■□□□□ 0.74
DDX55-212ENST00000544738 ASNSP08243 561 aa19.66■□□□□ 0.74
DDX55-212ENST00000544738 DYNLL1P63167 89 aaKnown RBP19.66■□□□□ 0.74
DDX55-212ENST00000544738 MFSD14CQ5VZR4 134 aa19.66■□□□□ 0.74
DDX55-212ENST00000544738 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDX55-212ENST00000544738 EDC3Q96F86 508 aaKnown RBP19.66■□□□□ 0.74
DDX55-212ENST00000544738 APBA2Q99767 749 aa19.66■□□□□ 0.74
DDX55-212ENST00000544738 WDR18Q9BV38 432 aa19.66■□□□□ 0.74
DDX55-212ENST00000544738 PRDM5Q9NQX1 630 aaPredicted RBP19.66■□□□□ 0.74
DDX55-212ENST00000544738 PALD1Q9ULE6 856 aa19.66■□□□□ 0.74
DDX55-212ENST00000544738 NDUFB9Q9Y6M9 179 aa19.66■□□□□ 0.74
DDX55-212ENST00000544738 MYO5AQ9Y4I1 1855 aaKnown RBP19.66■□□□□ 0.74
DDX55-212ENST00000544738 MIGA1Q8NAN2 632 aa19.65■□□□□ 0.74
DDX55-212ENST00000544738 BADQ92934 168 aa19.65■□□□□ 0.74
DDX55-212ENST00000544738 DDX20Q9UHI6 824 aaKnown RBP19.65■□□□□ 0.74
DDX55-212ENST00000544738 TNFRSF10AO00220 468 aa19.64■□□□□ 0.73
DDX55-212ENST00000544738 USP5P45974 858 aa19.64■□□□□ 0.73
DDX55-212ENST00000544738 SMAD3P84022 425 aaKnown RBP19.64■□□□□ 0.73
DDX55-212ENST00000544738 MAP2K5Q13163 448 aa19.64■□□□□ 0.73
DDX55-212ENST00000544738 WDR78Q5VTH9 848 aa19.64■□□□□ 0.73
DDX55-212ENST00000544738 LPAR1Q92633 364 aa19.64■□□□□ 0.73
DDX55-212ENST00000544738 FLRT1Q9NZU1 646 aa19.64■□□□□ 0.73
DDX55-212ENST00000544738 FOCADQ5VW36 1801 aa19.63■□□□□ 0.73
DDX55-212ENST00000544738 ATP2B2Q01814 1243 aa19.63■□□□□ 0.73
DDX55-212ENST00000544738 TJAP1Q5JTD0 557 aa19.63■□□□□ 0.73
DDX55-212ENST00000544738 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
DDX55-212ENST00000544738 DNAJC18Q9H819 358 aa19.63■□□□□ 0.73
DDX55-212ENST00000544738 SAP30BPQ9UHR5 308 aaKnown RBP19.63■□□□□ 0.73
DDX55-212ENST00000544738 CDK5RAP2Q96SN8 1893 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 LOC285556D6RIA3 1793 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 USP17L10C9JJH3 530 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 DNM1LO00429 736 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
DDX55-212ENST00000544738 SLC9C2Q5TAH2 1124 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 C20orf194Q5TEA3 1177 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 TTC6Q86TZ1 520 aa19.62■□□□□ 0.73
DDX55-212ENST00000544738 ATAD5Q96QE3 1844 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 MAGEB6P1A0A0J9YX57 407 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 MSCO60682 206 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 GLRX3O76003 335 aaKnown RBP19.61■□□□□ 0.73
DDX55-212ENST00000544738 JAG1P78504 1218 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 POTEEQ6S8J3 1075 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 SLC39A5Q6ZMH5 540 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 GTF3C2Q8WUA4 911 aaPredicted RBP19.61■□□□□ 0.73
DDX55-212ENST00000544738 DNAJC2Q99543 621 aaKnown RBP19.61■□□□□ 0.73
DDX55-212ENST00000544738 BCL11AQ9H165 835 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 EHD4Q9H223 541 aa19.61■□□□□ 0.73
DDX55-212ENST00000544738 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
DDX55-212ENST00000544738 GOLIM4O00461 696 aa19.6■□□□□ 0.73
DDX55-212ENST00000544738 PDE6AP16499 860 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms