RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 LRRC4CQ9HCJ2 640 aa8.42□□□□□ -1.06
LEMD3-205ENST00000544506 PIM2Q9P1W9 311 aa8.42□□□□□ -1.06
LEMD3-205ENST00000544506 TPX2Q9ULW0 747 aaKnown RBP8.42□□□□□ -1.06
LEMD3-205ENST00000544506 U3KQE9 123 aa8.42□□□□□ -1.06
LEMD3-205ENST00000544506 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 RBAK-RBAKDNI3L0D1 243 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 TNFRSF10CO14798 259 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 GIPRP48546 466 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 ZNF746Q6NUN9 644 aaPredicted RBP8.41□□□□□ -1.06
LEMD3-205ENST00000544506 MCF2L2Q86YR7 1114 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 CRBNQ96SW2 442 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 PRDM5Q9NQX1 630 aaPredicted RBP8.41□□□□□ -1.06
LEMD3-205ENST00000544506 GTF2IRD1Q9UHL9 959 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 CEP131Q9UPN4 1083 aa8.41□□□□□ -1.06
LEMD3-205ENST00000544506 RGS13O14921 159 aa8.4□□□□□ -1.06
LEMD3-205ENST00000544506 CYP26A1O43174 497 aa8.4□□□□□ -1.06
LEMD3-205ENST00000544506 SSBP05455 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
LEMD3-205ENST00000544506 RUFY4Q6ZNE9 571 aa8.4□□□□□ -1.06
LEMD3-205ENST00000544506 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.06
LEMD3-205ENST00000544506 TM9SF2Q99805 663 aa8.4□□□□□ -1.06
LEMD3-205ENST00000544506 RNF112Q9ULX5 631 aa8.4□□□□□ -1.06
LEMD3-205ENST00000544506 MAPK8IP1Q9UQF2 711 aa8.4□□□□□ -1.06
LEMD3-205ENST00000544506 UBOX5O94941 541 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 ACRP10323 421 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 FOSL1P15407 271 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
LEMD3-205ENST00000544506 GBP1P32455 592 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 ETV3P41162 512 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 TAB3Q8N5C8 712 aaPredicted RBP8.39□□□□□ -1.07
LEMD3-205ENST00000544506 OR6P1Q8NGX9 317 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 SLC9A7Q96T83 725 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 MRVI1Q9Y6F6 885 aa8.39□□□□□ -1.07
LEMD3-205ENST00000544506 IGF2BP3O00425 579 aaKnown RBP eCLIP8.38□□□□□ -1.07
LEMD3-205ENST00000544506 GUCY2CP25092 1073 aa8.38□□□□□ -1.07
LEMD3-205ENST00000544506 OXCT1P55809 520 aa8.38□□□□□ -1.07
LEMD3-205ENST00000544506 SFRP5Q5T4F7 317 aa8.38□□□□□ -1.07
LEMD3-205ENST00000544506 FAM86C2PA6NEL3 165 aa8.37□□□□□ -1.07
LEMD3-205ENST00000544506 PRR33A8MZF0 331 aa8.37□□□□□ -1.07
LEMD3-205ENST00000544506 CYP7A1P22680 504 aa8.37□□□□□ -1.07
LEMD3-205ENST00000544506 ARHGAP27Q6ZUM4 889 aa8.37□□□□□ -1.07
LEMD3-205ENST00000544506 FAM169BQ8N8A8 192 aa8.37□□□□□ -1.07
LEMD3-205ENST00000544506 COL17A1Q9UMD9 1497 aaPredicted RBP8.37□□□□□ -1.07
LEMD3-205ENST00000544506 CEACAM5P06731 702 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 ITIH2P19823 946 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 GRIK1P39086 918 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 CCNFP41002 786 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 ZYXQ15942 572 aaKnown RBP8.36□□□□□ -1.07
LEMD3-205ENST00000544506 INTS3Q68E01 1043 aaKnown RBP8.36□□□□□ -1.07
LEMD3-205ENST00000544506 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 RNF141Q8WVD5 230 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 COX4I2Q96KJ9 171 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 KREMEN1Q96MU8 473 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 TANGO6Q9C0B7 1094 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 MKNK2Q9HBH9 465 aa8.36□□□□□ -1.07
LEMD3-205ENST00000544506 ZC3H7BQ9UGR2 993 aaKnown RBP8.36□□□□□ -1.07
LEMD3-205ENST00000544506 GNAT3A8MTJ3 354 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 COBLO75128 1261 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 CBX7O95931 251 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 ZNF865P0CJ78 1059 aaPredicted RBP8.35□□□□□ -1.07
LEMD3-205ENST00000544506 ETFBP38117 255 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 CHMP4BP1P59074 171 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 MSMPQ1L6U9 139 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 TMEM192Q8IY95 271 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 PLD6Q8N2A8 252 aaKnown RBP8.35□□□□□ -1.07
LEMD3-205ENST00000544506 C19orf47Q8N9M1 422 aaKnown RBP8.35□□□□□ -1.07
LEMD3-205ENST00000544506 SLC6A18Q96N87 628 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.35□□□□□ -1.07
LEMD3-205ENST00000544506 ZNF408Q9H9D4 720 aa8.35□□□□□ -1.07
LEMD3-205ENST00000544506 MED26O95402 600 aa8.34□□□□□ -1.07
LEMD3-205ENST00000544506 INTS5Q6P9B9 1019 aaKnown RBP8.34□□□□□ -1.07
LEMD3-205ENST00000544506 UNC5AQ6ZN44 842 aa8.34□□□□□ -1.07
LEMD3-205ENST00000544506 TTC6Q86TZ1 520 aa8.34□□□□□ -1.07
LEMD3-205ENST00000544506 MFSD4AQ8N468 514 aa8.34□□□□□ -1.07
LEMD3-205ENST00000544506 ASPNQ9BXN1 380 aa8.34□□□□□ -1.07
LEMD3-205ENST00000544506 PLAGL2Q9UPG8 496 aa8.34□□□□□ -1.07
LEMD3-205ENST00000544506 CAPN6Q9Y6Q1 641 aa8.34□□□□□ -1.07
LEMD3-205ENST00000544506 A0A1W2PQH9 124 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 SMAD7O15105 426 aaKnown RBP8.33□□□□□ -1.08
LEMD3-205ENST00000544506 CLEC3AO75596 197 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 SSTR4P31391 388 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 KIR3DL1P43629 444 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 CD97P48960 835 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 NKPD1Q17RQ9 610 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 ZMYM1Q5SVZ6 1142 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 SPACA3Q8IXA5 215 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 NETO1Q8TDF5 533 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 VWCEQ96DN2 955 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 ZNF512BQ96KM6 892 aaPredicted RBP8.33□□□□□ -1.08
LEMD3-205ENST00000544506 Q96M66 194 aa8.33□□□□□ -1.08
LEMD3-205ENST00000544506 LTBP3Q9NS15 1303 aa8.32□□□□□ -1.08
LEMD3-205ENST00000544506 RANGAP1P46060 587 aaPredicted RBP8.32□□□□□ -1.08
LEMD3-205ENST00000544506 RNF4P78317 190 aa8.32□□□□□ -1.08
LEMD3-205ENST00000544506 PPP2R5EQ16537 467 aa8.32□□□□□ -1.08
LEMD3-205ENST00000544506 IFI16Q16666 785 aaKnown RBP8.32□□□□□ -1.08
LEMD3-205ENST00000544506 SUCOQ9UBS9 1254 aaKnown RBP8.32□□□□□ -1.08
LEMD3-205ENST00000544506 PRKAG3Q9UGI9 489 aa8.32□□□□□ -1.08
LEMD3-205ENST00000544506 FAM155AB1AL88 458 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-205ENST00000544506 LRRN2O75325 713 aa8.31□□□□□ -1.08
LEMD3-205ENST00000544506 ATP2B1P20020 1258 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms