RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DHX36Q9H2U1 1008 aaKnown RBP10.83□□□□□ -0.68
GNE-206ENST00000543356 KAT14Q9H8E8 782 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 GDPD2Q9HCC8 539 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 MYH6P13533 1939 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 NFKBIEO00221 500 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 RAD17O75943 681 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 FUT2Q10981 343 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 TMTC3Q6ZXV5 915 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 CTCFLQ8NI51 663 aaPredicted RBP10.83□□□□□ -0.68
GNE-206ENST00000543356 SCAND2PQ9GZW5 306 aaPredicted RBP10.83□□□□□ -0.68
GNE-206ENST00000543356 PPP1R1BQ9UD71 204 aaPredicted RBP10.83□□□□□ -0.68
GNE-206ENST00000543356 FAM198AQ9UFP1 575 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 HDAC9Q9UKV0 1011 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 ATRNL1Q5VV63 1379 aa10.83□□□□□ -0.68
GNE-206ENST00000543356 UBE2HP62256 183 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 GUCY1B3Q02153 619 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 TMEM132AQ24JP5 1023 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 BRAPQ7Z569 592 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 ENTPD3O75355 529 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 KIF5BP33176 963 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 TRIM29Q14134 588 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 FAM173BQ6P4H8 233 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 PNMA1Q8ND90 353 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 CFAP45Q9UL16 551 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 CNTNAP5Q8WYK1 1306 aa10.82□□□□□ -0.68
GNE-206ENST00000543356 IGKV6D-41A0A0C4DH26 115 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 SPDYE2BA6NHP3 402 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 PRPF3O43395 683 aaKnown RBP10.81□□□□□ -0.68
GNE-206ENST00000543356 GADD45BO75293 160 aaPredicted RBP10.81□□□□□ -0.68
GNE-206ENST00000543356 SPDYE6P0CI01 402 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 MMP14P50281 582 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 KIF23Q02241 960 aaPredicted RBP10.81□□□□□ -0.68
GNE-206ENST00000543356 GRM4Q14833 912 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 KRT40Q6A162 431 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 ZNF396Q96N95 335 aaPredicted RBP10.81□□□□□ -0.68
GNE-206ENST00000543356 AIFM3Q96NN9 605 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 PLEKHA8P1O95397 391 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 SHMT1P34896 483 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 OTUD7BQ6GQQ9 843 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
GNE-206ENST00000543356 JDP2Q8WYK2 163 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 TMEM47Q9BQJ4 181 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 BCS1LQ9Y276 419 aa10.81□□□□□ -0.68
GNE-206ENST00000543356 CXCL9Q07325 125 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 CIAPIN1Q6FI81 312 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 METTL16Q86W50 562 aaKnown RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 ZFPM1Q8IX07 1006 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 OGFOD1Q8N543 542 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 LEO1Q8WVC0 666 aaPredicted RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 BBXQ8WY36 941 aaPredicted RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 SPATA32Q96LK8 384 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.8□□□□□ -0.68
GNE-206ENST00000543356 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 TDRD3Q9H7E2 651 aaKnown RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 RBM27Q9P2N5 1060 aaKnown RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 PI4KBQ9UBF8 816 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 TOP1P11387 765 aaKnown RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 GUCY1A2P33402 732 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 GNAQP50148 359 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 CACNB3P54284 484 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 TNIP1Q15025 636 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 DLGAP5Q15398 846 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 CMTR1Q8N1G2 835 aaKnown RBP10.8□□□□□ -0.68
GNE-206ENST00000543356 CEP95Q96GE4 821 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 GJB4Q9NTQ9 266 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 TMOD2Q9NZR1 351 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 STX8Q9UNK0 236 aa10.8□□□□□ -0.68
GNE-206ENST00000543356 KIF28PB7ZC32 967 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 MMP1P03956 469 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 AKR1B1P15121 316 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 SPDYE2Q495Y8 402 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 PPP4R3BQ5MIZ7 849 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 CAVIN1Q6NZI2 390 aaKnown RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 SH3BP5LQ7L8J4 393 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 SRBD1Q8N5C6 995 aaKnown RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 NLGN2Q8NFZ4 835 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 CCDC17Q96LX7 622 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 DDTLA6NHG4 134 aaPredicted RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 UBE2Q2LH0YL09 131 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 RPS12P25398 132 aaKnown RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 U2AF2P26368 475 aaKnown RBP eCLIP10.79□□□□□ -0.68
GNE-206ENST00000543356 TCP10Q12799 353 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 PKN1Q16512 942 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 FKBP1CQ5VVH2 108 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 FOXP4Q8IVH2 680 aaPredicted RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 SYAP1Q96A49 352 aaPredicted RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 ZBED3Q96IU2 234 aaPredicted RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 LZTS2Q9BRK4 669 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 DNAJC18Q9H819 358 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 SPON1Q9HCB6 807 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 MTMR4Q9NYA4 1195 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 MAD2L2Q9UI95 211 aa10.79□□□□□ -0.68
GNE-206ENST00000543356 ISY1Q9ULR0 285 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms