RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 IPO9Q96P70 1041 aaKnown RBP11.78□□□□□ -0.52
LRP6-205ENST00000540527 MIR1-1HGQ9H1L0 117 aa11.78□□□□□ -0.52
LRP6-205ENST00000540527 TRBV23-1A0A0A0MS06 115 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 A6NCN8 305 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 ENC1O14682 589 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 BPIP17213 487 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 PSEN2P49810 448 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 IDH3AP50213 366 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 ARMC3Q5W041 872 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 LDHAL6AQ6ZMR3 332 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 C1orf122Q6ZSJ8 110 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 OR8H2Q8N162 312 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 RSPH1Q8WYR4 309 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 PPM1MQ96MI6 270 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.77□□□□□ -0.53
LRP6-205ENST00000540527 ACAD8Q9UKU7 415 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 PCDHGB3Q9Y5G1 929 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 KCNMB2Q9Y691 235 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
LRP6-205ENST00000540527 K7ESF4 209 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 KHNYNO15037 678 aaKnown RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 ASGR2P07307 311 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 ARSDP51689 593 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 NEK4P51957 841 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 RBM10P98175 930 aaKnown RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 DHX9Q08211 1270 aaKnown RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 GRB10Q13322 594 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 SPECC1Q5M775 1068 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 VHLLQ6RSH7 139 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 MYLK4Q86YV6 388 aaPredicted RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 CBARPQ8N350 705 aaPredicted RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 SPATA5Q8NB90 893 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 NAXEQ8NCW5 288 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 NECAB3Q96P71 396 aaPredicted RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 MTFR1LQ9H019 292 aa11.76□□□□□ -0.53
LRP6-205ENST00000540527 TRMT13Q9NUP7 481 aaKnown RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
LRP6-205ENST00000540527 NEMP1O14524 444 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 LILRA1O75019 489 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 ATE1O95260 518 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 CCND1P24385 295 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 RECQLP46063 649 aaPredicted RBP11.75□□□□□ -0.53
LRP6-205ENST00000540527 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
LRP6-205ENST00000540527 TRIM61Q5EBN2 209 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 ACRBPQ8NEB7 543 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 CNKSR1Q969H4 720 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 KIFC2Q96AC6 838 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 FUBP3Q96I24 572 aaKnown RBP eCLIP11.75□□□□□ -0.53
LRP6-205ENST00000540527 NAA15Q9BXJ9 866 aaKnown RBP11.75□□□□□ -0.53
LRP6-205ENST00000540527 LATS2Q9NRM7 1088 aa11.75□□□□□ -0.53
LRP6-205ENST00000540527 SAP30BPQ9UHR5 308 aaKnown RBP11.75□□□□□ -0.53
LRP6-205ENST00000540527 TTC36A6NLP5 189 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 K7ENM7 598 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 DDX3YO15523 660 aaKnown RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 HSD3B1P14060 373 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 EDN3P14138 238 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 PDCD2Q16342 344 aaPredicted RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 PEAR1Q5VY43 1037 aaPredicted RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 OTOP3Q7RTS5 596 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 SCUBE1Q8IWY4 988 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 CHCHD4Q8N4Q1 142 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 TAB3Q8N5C8 712 aaPredicted RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 PAWRQ96IZ0 340 aaKnown RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 OSBPL5Q9H0X9 879 aaPredicted RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 TRIM39Q9HCM9 518 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 ARHGEF4Q9NR80 690 aa11.74□□□□□ -0.53
LRP6-205ENST00000540527 ABI2Q9NYB9 513 aaPredicted RBP11.74□□□□□ -0.53
LRP6-205ENST00000540527 TRAV20A0A0B4J274 112 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 MEIS3P2A8K0S8 358 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 AGRPO00253 132 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 ZKSCAN1P17029 563 aaPredicted RBP11.73□□□□□ -0.53
LRP6-205ENST00000540527 CES1P23141 567 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 CMTR1Q8N1G2 835 aaKnown RBP11.73□□□□□ -0.53
LRP6-205ENST00000540527 NKAIN3Q8N8D7 197 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 GOLGA1Q92805 767 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 NUP88Q99567 741 aaPredicted RBP11.73□□□□□ -0.53
LRP6-205ENST00000540527 EIF2AK1Q9BQI3 630 aaKnown RBP11.73□□□□□ -0.53
LRP6-205ENST00000540527 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 USP20Q9Y2K6 914 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 PCDHB5Q9Y5E4 795 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 PCDHB14Q9Y5E9 798 aa11.73□□□□□ -0.53
LRP6-205ENST00000540527 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 A0A1B0GVC2 190 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 TLR5O60602 858 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 PRKD3O94806 890 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 MYBL2P10244 700 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 PYGMP11217 842 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 INPP5BP32019 993 aa11.72□□□□□ -0.53
LRP6-205ENST00000540527 SH3BP2P78314 561 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms