RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 XRCC5P13010 732 aaKnown RBP18.48■□□□□ 0.55
UBE3B-211ENST00000539843 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
UBE3B-211ENST00000539843 CYP2B6P20813 491 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 JAG1P78504 1218 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 ZSCAN25Q6NSZ9 544 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 NECAB2Q7Z6G3 386 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 KIAA1683Q9H0B3 1180 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 PAG1Q9NWQ8 432 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 SWAP70Q9UH65 585 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 GJD2Q9UKL4 321 aa18.48■□□□□ 0.55
UBE3B-211ENST00000539843 CENPFP49454 3210 aa18.47■□□□□ 0.55
UBE3B-211ENST00000539843 WDR78Q5VTH9 848 aa18.47■□□□□ 0.55
UBE3B-211ENST00000539843 CHRDL2Q6WN34 429 aa18.47■□□□□ 0.55
UBE3B-211ENST00000539843 PLEKHH3Q7Z736 793 aa18.47■□□□□ 0.55
UBE3B-211ENST00000539843 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
UBE3B-211ENST00000539843 RABGAP1Q9Y3P9 1069 aa18.47■□□□□ 0.55
UBE3B-211ENST00000539843 CDK5RAP2Q96SN8 1893 aa18.47■□□□□ 0.55
UBE3B-211ENST00000539843 SHROOM1Q2M3G4 852 aaPredicted RBP18.46■□□□□ 0.55
UBE3B-211ENST00000539843 GPR142Q7Z601 462 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 LRRCC1Q9C099 1032 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 BOLA2Q9H3K6 86 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 SH2D4AQ9H788 454 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 TXNRD2Q9NNW7 524 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 RBPJLQ9UBG7 517 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 IVNS1ABPQ9Y6Y0 642 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 MYH1P12882 1939 aa18.46■□□□□ 0.55
UBE3B-211ENST00000539843 ATP5JP18859 108 aa18.45■□□□□ 0.54
UBE3B-211ENST00000539843 VCAM1P19320 739 aa18.45■□□□□ 0.54
UBE3B-211ENST00000539843 SHMT1P34896 483 aa18.45■□□□□ 0.54
UBE3B-211ENST00000539843 PLCD1P51178 756 aa18.45■□□□□ 0.54
UBE3B-211ENST00000539843 GPATCH3Q96I76 525 aa18.45■□□□□ 0.54
UBE3B-211ENST00000539843 APBA2Q99767 749 aa18.45■□□□□ 0.54
UBE3B-211ENST00000539843 ATP8A2Q9NTI2 1148 aa18.45■□□□□ 0.54
UBE3B-211ENST00000539843 MYO5AQ9Y4I1 1855 aaKnown RBP18.45■□□□□ 0.54
UBE3B-211ENST00000539843 PRKAR2AP13861 404 aaKnown RBP18.44■□□□□ 0.54
UBE3B-211ENST00000539843 CATSPERGQ6ZRH7 1159 aa18.44■□□□□ 0.54
UBE3B-211ENST00000539843 TMEM179Q6ZVK1 233 aa18.44■□□□□ 0.54
UBE3B-211ENST00000539843 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
UBE3B-211ENST00000539843 SDR42E1Q8WUS8 393 aa18.44■□□□□ 0.54
UBE3B-211ENST00000539843 TRIB2Q92519 343 aa18.44■□□□□ 0.54
UBE3B-211ENST00000539843 PAWRQ96IZ0 340 aaKnown RBP18.44■□□□□ 0.54
UBE3B-211ENST00000539843 NBPF3Q9H094 633 aa18.44■□□□□ 0.54
UBE3B-211ENST00000539843 ARHGEF10LQ9HCE6 1279 aa18.44■□□□□ 0.54
UBE3B-211ENST00000539843 DCP1AQ9NPI6 582 aaPredicted RBP18.44■□□□□ 0.54
UBE3B-211ENST00000539843 MBD4O95243 580 aa18.43■□□□□ 0.54
UBE3B-211ENST00000539843 ADD2P35612 726 aa18.43■□□□□ 0.54
UBE3B-211ENST00000539843 SIRT2Q8IXJ6 389 aa18.43■□□□□ 0.54
UBE3B-211ENST00000539843 HAUS7Q99871 368 aa18.43■□□□□ 0.54
UBE3B-211ENST00000539843 RPAP3Q9H6T3 665 aaPredicted RBP18.43■□□□□ 0.54
UBE3B-211ENST00000539843 ARMT1Q9H993 441 aa18.43■□□□□ 0.54
UBE3B-211ENST00000539843 NAV1Q8NEY1 1877 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 TCRBV5S4A2TA0A5A2 114 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.54
UBE3B-211ENST00000539843 GABPAQ06546 454 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 MAP2K5Q13163 448 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 SEPT2Q15019 361 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 UBE3CQ15386 1083 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 MFSD14CQ5VZR4 134 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 ACER1Q8TDN7 264 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 TANGO6Q9C0B7 1094 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 PORCNQ9H237 461 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 HOXC10Q9NYD6 342 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 BRCA2P51587 3418 aa18.42■□□□□ 0.54
UBE3B-211ENST00000539843 Q3C1V9 767 aa18.41■□□□□ 0.54
UBE3B-211ENST00000539843 LPAR1Q92633 364 aa18.41■□□□□ 0.54
UBE3B-211ENST00000539843 EDC3Q96F86 508 aaKnown RBP18.41■□□□□ 0.54
UBE3B-211ENST00000539843 CCDC17Q96LX7 622 aa18.41■□□□□ 0.54
UBE3B-211ENST00000539843 C11orf49Q9H6J7 331 aa18.41■□□□□ 0.54
UBE3B-211ENST00000539843 SLC15A5A6NIM6 579 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 ICA1Q05084 483 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 TRIM32Q13049 653 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 COG2Q14746 738 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 LRRFIP1Q32MZ4 808 aaKnown RBP18.4■□□□□ 0.54
UBE3B-211ENST00000539843 MORN1Q5T089 497 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 MB21D1Q8N884 522 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 SLC5A4Q9NY91 659 aa18.4■□□□□ 0.54
UBE3B-211ENST00000539843 A0A1W2PPC1 479 aa18.39■□□□□ 0.53
UBE3B-211ENST00000539843 PEX10O60683 326 aa18.39■□□□□ 0.53
UBE3B-211ENST00000539843 ATP2B2Q01814 1243 aa18.39■□□□□ 0.53
UBE3B-211ENST00000539843 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.53
UBE3B-211ENST00000539843 OGDHLQ9ULD0 1010 aa18.39■□□□□ 0.53
UBE3B-211ENST00000539843 SLC4A4Q9Y6R1 1079 aa18.39■□□□□ 0.53
UBE3B-211ENST00000539843 MKI67P46013 3256 aaKnown RBP18.39■□□□□ 0.53
UBE3B-211ENST00000539843 CEP290O15078 2479 aa18.39■□□□□ 0.53
UBE3B-211ENST00000539843 DDX60LQ5H9U9 1706 aaKnown RBP18.38■□□□□ 0.53
UBE3B-211ENST00000539843 SPDYE16A6NNV3 312 aaPredicted RBP18.38■□□□□ 0.53
UBE3B-211ENST00000539843 MSCO60682 206 aa18.38■□□□□ 0.53
UBE3B-211ENST00000539843 PTPREP23469 700 aa18.38■□□□□ 0.53
UBE3B-211ENST00000539843 CACNB2Q08289 660 aaPredicted RBP18.38■□□□□ 0.53
UBE3B-211ENST00000539843 USP6NLQ92738 828 aa18.38■□□□□ 0.53
UBE3B-211ENST00000539843 RBM27Q9P2N5 1060 aaKnown RBP18.38■□□□□ 0.53
UBE3B-211ENST00000539843 ARPP21Q9UBL0 812 aaPredicted RBP18.38■□□□□ 0.53
UBE3B-211ENST00000539843 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
UBE3B-211ENST00000539843 FLOT1O75955 427 aa18.37■□□□□ 0.53
UBE3B-211ENST00000539843 CYP2D6P10635 497 aa18.37■□□□□ 0.53
UBE3B-211ENST00000539843 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
UBE3B-211ENST00000539843 DPP9Q86TI2 863 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms