RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
USB1-203ENST00000539737 TRPV1Q8NER1 839 aa18.23■□□□□ 0.51
USB1-203ENST00000539737 TBC1D2Q9BYX2 928 aa18.23■□□□□ 0.51
USB1-203ENST00000539737 SENP6Q9GZR1 1112 aaPredicted RBP18.23■□□□□ 0.51
USB1-203ENST00000539737 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
USB1-203ENST00000539737 BTBD7Q9P203 1132 aa18.23■□□□□ 0.51
USB1-203ENST00000539737 BAG3O95817 575 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 CYP2C19P33261 490 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 RGS2P41220 211 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 PPP4CP60510 307 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 OS9Q13438 667 aaPredicted RBP18.22■□□□□ 0.51
USB1-203ENST00000539737 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
USB1-203ENST00000539737 NPLOC4Q8TAT6 608 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 GUCD1Q96NT3 240 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 FEZ1Q99689 392 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 APBA2Q99767 749 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 DHX36Q9H2U1 1008 aaKnown RBP18.22■□□□□ 0.51
USB1-203ENST00000539737 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 CWC22Q9HCG8 908 aaKnown RBP18.22■□□□□ 0.51
USB1-203ENST00000539737 DBNLQ9UJU6 430 aaKnown RBP18.22■□□□□ 0.51
USB1-203ENST00000539737 STXBP5LQ9Y2K9 1186 aa18.22■□□□□ 0.51
USB1-203ENST00000539737 MAP4K4O95819 1239 aaPredicted RBP18.21■□□□□ 0.51
USB1-203ENST00000539737 XRCC5P13010 732 aaKnown RBP18.21■□□□□ 0.51
USB1-203ENST00000539737 CNGA1P29973 690 aa18.21■□□□□ 0.51
USB1-203ENST00000539737 MAPK4P31152 587 aa18.21■□□□□ 0.51
USB1-203ENST00000539737 RAB3GAP1Q15042 981 aa18.21■□□□□ 0.51
USB1-203ENST00000539737 USP17L2Q6R6M4 530 aa18.21■□□□□ 0.51
USB1-203ENST00000539737 C19orf81C9J6K1 198 aa18.2■□□□□ 0.5
USB1-203ENST00000539737 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
USB1-203ENST00000539737 MAP2K5Q13163 448 aa18.2■□□□□ 0.5
USB1-203ENST00000539737 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
USB1-203ENST00000539737 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
USB1-203ENST00000539737 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
USB1-203ENST00000539737 PRUNE2Q8WUY3 3088 aa18.2■□□□□ 0.5
USB1-203ENST00000539737 SPTBN5Q9NRC6 3674 aaKnown RBP18.19■□□□□ 0.5
USB1-203ENST00000539737 VCAM1P19320 739 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 POLA2Q14181 598 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 CEP85Q6P2H3 762 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 MAGEB6Q8N7X4 407 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 SSH3Q8TE77 659 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 LTBP2Q14767 1821 aa18.19■□□□□ 0.5
USB1-203ENST00000539737 SURF6O75683 361 aaKnown RBP18.18■□□□□ 0.5
USB1-203ENST00000539737 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
USB1-203ENST00000539737 HLA-DOAP06340 250 aa18.18■□□□□ 0.5
USB1-203ENST00000539737 CAPN2P17655 700 aa18.18■□□□□ 0.5
USB1-203ENST00000539737 GUCY1A2P33402 732 aa18.18■□□□□ 0.5
USB1-203ENST00000539737 USP5P45974 858 aa18.18■□□□□ 0.5
USB1-203ENST00000539737 PLCD1P51178 756 aa18.18■□□□□ 0.5
USB1-203ENST00000539737 CCDC158Q5M9N0 1113 aa18.18■□□□□ 0.5
USB1-203ENST00000539737 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
USB1-203ENST00000539737 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
USB1-203ENST00000539737 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
USB1-203ENST00000539737 ZBTB40Q9NUA8 1239 aa18.18■□□□□ 0.5
USB1-203ENST00000539737 PLCG2P16885 1265 aa18.17■□□□□ 0.5
USB1-203ENST00000539737 PTPREP23469 700 aa18.17■□□□□ 0.5
USB1-203ENST00000539737 KIAA1755Q5JYT7 1200 aa18.17■□□□□ 0.5
USB1-203ENST00000539737 PRAMEF19Q5SWL8 479 aa18.17■□□□□ 0.5
USB1-203ENST00000539737 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
USB1-203ENST00000539737 BCL11AQ9H165 835 aa18.17■□□□□ 0.5
USB1-203ENST00000539737 RPAP3Q9H6T3 665 aaPredicted RBP18.17■□□□□ 0.5
USB1-203ENST00000539737 DDX20Q9UHI6 824 aaKnown RBP18.17■□□□□ 0.5
USB1-203ENST00000539737 SPDYE16A6NNV3 312 aaPredicted RBP18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L15C9J2P7 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L13C9JLJ4 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L11C9JVI0 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L18D6R9N7 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L22D6RA61 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L17D6RBQ6 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L19D6RCP7 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L20D6RJB6 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 SMIM22K7EJ46 135 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 CYP2D6P10635 497 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 SHMT1P34896 483 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 RTP1P59025 263 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 USP17L24Q0WX57 530 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 GPR153Q6NV75 609 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 TATDN1Q6P1N9 297 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 ATP11BQ9Y2G3 1177 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 RABGAP1Q9Y3P9 1069 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 NAV1Q8NEY1 1877 aa18.16■□□□□ 0.5
USB1-203ENST00000539737 A0A1W2PRG0 241 aa18.15■□□□□ 0.5
USB1-203ENST00000539737 HMMRO75330 724 aa18.15■□□□□ 0.5
USB1-203ENST00000539737 SEPT2Q15019 361 aa18.15■□□□□ 0.5
USB1-203ENST00000539737 ABCB5Q2M3G0 1257 aa18.15■□□□□ 0.5
USB1-203ENST00000539737 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
USB1-203ENST00000539737 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
USB1-203ENST00000539737 SLC44A5Q8NCS7 719 aa18.15■□□□□ 0.5
USB1-203ENST00000539737 C12orf42Q96LP6 360 aa18.15■□□□□ 0.5
USB1-203ENST00000539737 RLFQ13129 1914 aa18.14■□□□□ 0.49
USB1-203ENST00000539737 ATP2B2Q01814 1243 aa18.14■□□□□ 0.49
USB1-203ENST00000539737 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.49
USB1-203ENST00000539737 MFSD14CQ5VZR4 134 aa18.14■□□□□ 0.49
USB1-203ENST00000539737 SH3RF1Q7Z6J0 888 aa18.14■□□□□ 0.49
USB1-203ENST00000539737 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.14■□□□□ 0.49
USB1-203ENST00000539737 PRDM5Q9NQX1 630 aaPredicted RBP18.14■□□□□ 0.49
USB1-203ENST00000539737 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms