RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 JMYQ8N9B5 988 aa14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
SFSWAP-208ENST00000539506 RREB1Q92766 1687 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 WNT7AO00755 349 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 CASP1P29466 404 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 LMAN1P49257 510 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 KLHL10Q6JEL2 608 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 C10orf67Q8IYJ2 551 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 VWA3AA6NCI4 1184 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 PRDM1O75626 825 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 TAF3Q5VWG9 929 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 CNNM3Q8NE01 707 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 HINFPQ9BQA5 517 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 INTS13Q9NVM9 706 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 TNKSO95271 1327 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 PTPREP23469 700 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 CASQ1P31415 396 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 STX17P56962 302 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 PKN1Q16512 942 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 DHX58Q96C10 678 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 MED15Q96RN5 788 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 ARGLU1Q9NWB6 273 aaPredicted RBP14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 RAI14Q9P0K7 980 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 PPP2R2CQ9Y2T4 447 aa14.35□□□□□ -0.11
SFSWAP-208ENST00000539506 CACNA1SQ13698 1873 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 TADA3O75528 432 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 FUT2Q10981 343 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 SMC1AQ14683 1233 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 ENAHQ8N8S7 591 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 PARD6BQ9BYG5 372 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 FOXP1Q9H334 677 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 PLEKHA4Q9H4M7 779 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 COL22A1Q8NFW1 1626 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 MAGEB6P1A0A0J9YX57 407 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 POLR2DO15514 142 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 TBC1D8O95759 1140 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 PTF1AQ7RTS3 328 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 CELF1Q92879 486 aaKnown RBP14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 CABP5Q9NP86 173 aa14.34□□□□□ -0.11
SFSWAP-208ENST00000539506 DEXIO95424 95 aa14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 MYL5Q02045 173 aa14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 LINC00116Q8NCU8 138 aa14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 CCDC12Q8WUD4 166 aaPredicted RBP14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 FAM84BQ96KN1 310 aaPredicted RBP14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 ANAPC4Q9UJX5 808 aa14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 MINPP1Q9UNW1 487 aa14.33□□□□□ -0.11
SFSWAP-208ENST00000539506 KIF2AO00139 706 aaPredicted RBP14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 ZRANB2O95218 330 aaKnown RBP eCLIP14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 PPP2R3AQ06190 1150 aa14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 SART3Q15020 963 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 SLC51AQ86UW1 340 aa14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 SAMSN1Q9NSI8 373 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 VPS54Q9P1Q0 977 aa14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 MAN1B1Q9UKM7 699 aa14.33□□□□□ -0.12
SFSWAP-208ENST00000539506 A0A087X0B3 334 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 N4BP1O75113 896 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 WASF1Q92558 559 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 ERICH2A1L162 156 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 ABL1P00519 1130 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 BICDL1Q6ZP65 573 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 BAG1Q99933 345 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 UBAC1Q9BSL1 405 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 LAMB2P55268 1798 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 BAZ2AQ9UIF9 1905 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 SOWAHDA6NJG2 315 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 ADAMTS3O15072 1205 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 NMT2O60551 498 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 RHOXF2BP0C7M4 288 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 SARSP49591 514 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 CC2D1AQ6P1N0 951 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 STAMQ92783 540 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 RHOXF2Q9BQY4 288 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 CSRNP2Q9H175 543 aa14.32□□□□□ -0.12
SFSWAP-208ENST00000539506 H3BQF6 201 aa14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 POSTNQ15063 836 aa14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 SAFBQ15424 915 aaKnown RBP eCLIP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 RILPL1Q5EBL4 403 aa14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 OLFM4Q6UX06 510 aa14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 ZSCAN10Q96SZ4 725 aaPredicted RBP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 RNF41Q9H4P4 317 aaPredicted RBP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 MRPL44Q9H9J2 332 aaKnown RBP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 BSDC1Q9NW68 430 aaPredicted RBP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 MYH2Q9UKX2 1941 aa14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 ACTN4O43707 911 aaKnown RBP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 SF3B3Q15393 1217 aaKnown RBP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 CTR9Q6PD62 1173 aa14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 SMYD4Q8IYR2 804 aaPredicted RBP14.31□□□□□ -0.12
SFSWAP-208ENST00000539506 TMTC2Q8N394 836 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms