RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 ZNF541Q9H0D2 1346 aa7.42□□□□□ -1.22
MDM2-225ENST00000539479 MYH1P12882 1939 aa7.42□□□□□ -1.22
MDM2-225ENST00000539479 GREB1LQ9C091 1923 aaPredicted RBP7.41□□□□□ -1.22
MDM2-225ENST00000539479 MINDY4BA8MYZ0 360 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 UBE2Q2LH0YL09 131 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 FZD9O00144 591 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 DPYSL4O14531 572 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 GTPBP6O43824 516 aaPredicted RBP7.41□□□□□ -1.22
MDM2-225ENST00000539479 ORC4O43929 436 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 NMT2O60551 498 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 PFKFB2O60825 505 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 RNF40O75150 1001 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 KDM4AO75164 1064 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 PDIA3P30101 505 aaKnown RBP7.41□□□□□ -1.22
MDM2-225ENST00000539479 GSTO1P78417 241 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 RRP1BQ14684 758 aaKnown RBP7.41□□□□□ -1.22
MDM2-225ENST00000539479 RAB3GAP1Q15042 981 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 SLC35G1Q2M3R5 365 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 GRIPAP1Q4V328 841 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 RCSD1Q6JBY9 416 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 TEX11Q8IYF3 940 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 DDX12PQ92771 950 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 GTF3C6Q969F1 213 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 SHISA4Q96DD7 197 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 PRMT6Q96LA8 375 aaPredicted RBP7.41□□□□□ -1.22
MDM2-225ENST00000539479 ZKSCAN3Q9BRR0 538 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 SYT17Q9BSW7 474 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 VPS33BQ9H267 617 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 TAOK3Q9H2K8 898 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 NCOA5Q9HCD5 579 aaKnown RBP7.41□□□□□ -1.22
MDM2-225ENST00000539479 IL17RBQ9NRM6 502 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 ZNRF3Q9ULT6 936 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 WDR19Q8NEZ3 1342 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 CNTNAP1P78357 1384 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 NID2Q14112 1375 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 ATRNL1Q5VV63 1379 aa7.41□□□□□ -1.22
MDM2-225ENST00000539479 DDTLA6NHG4 134 aaPredicted RBP7.4□□□□□ -1.22
MDM2-225ENST00000539479 LDHCP07864 332 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 FDPSP14324 419 aaKnown RBP7.4□□□□□ -1.22
MDM2-225ENST00000539479 RASA1P20936 1047 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 CDC27P30260 824 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 MCM2P49736 904 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 JAG1P78504 1218 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 HDLBPQ00341 1268 aaKnown RBP7.4□□□□□ -1.22
MDM2-225ENST00000539479 STK3Q13188 491 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 NBR1Q14596 966 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 CFAP100Q494V2 611 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 FAM47AQ5JRC9 791 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 SOGA3Q5TF21 947 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 RASGRP2Q7LDG7 609 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 NSUN7Q8NE18 718 aaKnown RBP7.4□□□□□ -1.22
MDM2-225ENST00000539479 NCOA7Q8NI08 942 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 INTS4Q96HW7 963 aaKnown RBP7.4□□□□□ -1.22
MDM2-225ENST00000539479 MYL10Q9BUA6 226 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 USP40Q9NVE5 1235 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 MCM9Q9NXL9 1143 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 TSKSQ9UJT2 592 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 SERPINA10Q9UK55 444 aa7.4□□□□□ -1.22
MDM2-225ENST00000539479 ASTN2O75129 1339 aaPredicted RBP7.4□□□□□ -1.22
MDM2-225ENST00000539479 DICER1Q9UPY3 1922 aaKnown RBP7.4□□□□□ -1.23
MDM2-225ENST00000539479 IGKV6D-41A0A0C4DH26 115 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 RANBP6O60518 1105 aaKnown RBP7.39□□□□□ -1.23
MDM2-225ENST00000539479 PPFIA3O75145 1194 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 BRD1O95696 1058 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 HMGB1P09429 215 aaKnown RBP7.39□□□□□ -1.23
MDM2-225ENST00000539479 RXRAP19793 462 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 MCM5P33992 734 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 SHMT1P34896 483 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 USP5P45974 858 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 NOVP48745 357 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 ZNF280AP59817 542 aaPredicted RBP7.39□□□□□ -1.23
MDM2-225ENST00000539479 FUT2Q10981 343 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 NTRK3Q16288 839 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 APOA5Q6Q788 366 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 C16orf86Q6ZW13 317 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 SGMS1Q86VZ5 419 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 NIM1KQ8IY84 436 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 ENAHQ8N8S7 591 aaPredicted RBP7.39□□□□□ -1.23
MDM2-225ENST00000539479 SMARCC2Q8TAQ2 1214 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 TEKT1Q969V4 418 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 IDI2Q9BXS1 227 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 NACAP1Q9BZK3 213 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 OSBPL5Q9H0X9 879 aaPredicted RBP7.39□□□□□ -1.23
MDM2-225ENST00000539479 TDRD3Q9H7E2 651 aaKnown RBP7.39□□□□□ -1.23
MDM2-225ENST00000539479 CHMP5Q9NZZ3 219 aa7.39□□□□□ -1.23
MDM2-225ENST00000539479 ARPP21Q9UBL0 812 aaPredicted RBP7.39□□□□□ -1.23
MDM2-225ENST00000539479 KLF18A0A0U1RQI7 1052 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 FAM196BA6NMK8 535 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 BAG3O95817 575 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 GUCY1A2P33402 732 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 CDK8P49336 464 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 CCT2P78371 535 aaKnown RBP7.38□□□□□ -1.23
MDM2-225ENST00000539479 PICALMQ13492 652 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 RRP12Q5JTH9 1297 aaKnown RBP7.38□□□□□ -1.23
MDM2-225ENST00000539479 MFSD6Q6ZSS7 791 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 METTL16Q86W50 562 aaKnown RBP7.38□□□□□ -1.23
MDM2-225ENST00000539479 CLEC10AQ8IUN9 316 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 MTMR14Q8NCE2 650 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 IL27Q8NEV9 243 aa7.38□□□□□ -1.23
MDM2-225ENST00000539479 TNPO1Q92973 898 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms