RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 H3BRB1 525 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 NDUFB5O43674 189 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 AKAP8O43823 692 aaKnown RBP4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 PAGE1O75459 146 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 TRIM37O94972 964 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 BMP6P22004 513 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 CYP7A1P22680 504 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 KIR3DL1P43629 444 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 ETF1P62495 437 aaKnown RBP4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 PDE3BQ13370 1112 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 PRAMEF13Q5VWM6 474 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 LLGL2Q6P1M3 1020 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 LRFN4Q6PJG9 635 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 TPTE2Q6XPS3 522 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 SIRT2Q8IXJ6 389 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 SP8Q8IXZ3 490 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 TEPSINQ96N21 525 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 BCO2Q9BYV7 579 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 TUT1Q9H6E5 874 aaKnown RBP4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 DUSP13Q9UII6 198 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 GPR182O15218 404 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 IGHA2P01877 340 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 XRCC5P13010 732 aaKnown RBP4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 LTKP29376 864 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 SRSF3P84103 164 aaKnown RBP4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 ADGRF1Q5T601 910 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 RASIP1Q5U651 963 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 PPP1R13LQ8WUF5 828 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 PLPPR2Q96GM1 343 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 FAM129BQ96TA1 746 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 NLRP2Q9NX02 1062 aa4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 MBD1Q9UIS9 605 aaPredicted RBP4.05□□□□□ -1.76
CBX3P4-201ENST00000538909 OR14I1A6ND48 311 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 TMEM88BA6NKF7 163 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 OVOL3O00110 214 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 ICMTO60725 284 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 FBXO24O75426 580 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 PRKCSHP14314 528 aaPredicted RBP4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 GAB4Q2WGN9 574 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 PHLDB3Q6NSJ2 640 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 NXPE4Q6UWF7 544 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 GLYCTKQ8IVS8 523 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 PIWIL2Q8TC59 973 aaKnown RBP4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 DHX38Q92620 1227 aaKnown RBP4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 CRELD1Q96HD1 420 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 NECAB3Q96P71 396 aaPredicted RBP4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 DPH2Q9BQC3 489 aaPredicted RBP4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 WNT10AQ9GZT5 417 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 DUSP15Q9H1R2 295 aaPredicted RBP4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 EPB41L4AQ9HCS5 686 aaPredicted RBP4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 SIRT5Q9NXA8 310 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 SAMM50Q9Y512 469 aa4.04□□□□□ -1.76
CBX3P4-201ENST00000538909 ZC3H12DA2A288 527 aaKnown RBP4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 CARNS1A5YM72 827 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 ENC1O14682 589 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 CST3P01034 146 aaPredicted RBP4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 HHIPL2Q6UWX4 724 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 HDXQ7Z353 690 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 HID1Q8IV36 788 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 SYTL4Q96C24 671 aaPredicted RBP4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 Q96M66 194 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 TRIT1Q9H3H1 467 aaKnown RBP4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 MYRFQ9Y2G1 1151 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 PCDHA11Q9Y5I1 949 aa4.03□□□□□ -1.76
CBX3P4-201ENST00000538909 PRICKLE3O43900 615 aaPredicted RBP4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 CDK8P49336 464 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 ZXDAP98168 799 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 PTPN11Q06124 597 aaPredicted RBP4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 RTP5Q14D33 572 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 LRRC14Q15048 493 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 NR0B2Q15466 257 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 SPPL2CQ8IUH8 684 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 SHISA4Q96DD7 197 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 CCDC97Q96F63 343 aaPredicted RBP4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 COX4I2Q96KJ9 171 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 LUC7LQ9NQ29 371 aaKnown RBP4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 GPATCH2Q9NW75 528 aa4.02□□□□□ -1.77
CBX3P4-201ENST00000538909 N4BP3O15049 544 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 GRIN3BO60391 1043 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 SLC24A1O60721 1099 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 SDHBP21912 280 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 GRK4P32298 578 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 CAP2P40123 477 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 ARHGAP4P98171 946 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 SNX17Q15036 470 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 WIPI1Q5MNZ9 446 aaPredicted RBP4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 CNKSR3Q6P9H4 555 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 FRMD5Q7Z6J6 570 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 CNTD2Q9H8S5 307 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 EBF1Q9UH73 591 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 PALD1Q9ULE6 856 aa4.01□□□□□ -1.77
CBX3P4-201ENST00000538909 CILPO75339 1184 aa4□□□□□ -1.77
CBX3P4-201ENST00000538909 FSHBP01225 129 aa4□□□□□ -1.77
CBX3P4-201ENST00000538909 VIPR1P32241 457 aa4□□□□□ -1.77
CBX3P4-201ENST00000538909 ETV3P41162 512 aa4□□□□□ -1.77
CBX3P4-201ENST00000538909 SERPINB4P48594 390 aa4□□□□□ -1.77
CBX3P4-201ENST00000538909 CHRNEQ04844 493 aa4□□□□□ -1.77
CBX3P4-201ENST00000538909 TSPYL5Q86VY4 417 aaPredicted RBP4□□□□□ -1.77
CBX3P4-201ENST00000538909 TMEFF1Q8IYR6 380 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms