RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
COPS7A-204ENST00000534947 CSRNP2Q9H175 543 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 DCP1AQ9NPI6 582 aaPredicted RBP21.46■■□□□ 1.03
COPS7A-204ENST00000534947 FANCLQ9NW38 375 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 ZNF18P17022 549 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 TRAPPC10P48553 1259 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 SPECC1Q5M775 1068 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 TNFRSF25Q93038 417 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 SHISA4Q96DD7 197 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 PPP1R13BQ96KQ4 1090 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 VPS54Q9P1Q0 977 aa21.46■■□□□ 1.03
COPS7A-204ENST00000534947 CNTNAP5Q8WYK1 1306 aa21.45■■□□□ 1.02
COPS7A-204ENST00000534947 FOXN1O15353 648 aa21.45■■□□□ 1.02
COPS7A-204ENST00000534947 PDE4BQ07343 736 aa21.45■■□□□ 1.02
COPS7A-204ENST00000534947 VPS72Q15906 364 aa21.45■■□□□ 1.02
COPS7A-204ENST00000534947 TPTE2Q6XPS3 522 aa21.45■■□□□ 1.02
COPS7A-204ENST00000534947 NBPF5PQ86XG9 351 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 CTCFLQ8NI51 663 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 TRMT1Q9NXH9 659 aaKnown RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 V9GY48 417 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 CYP2D7A0A087X1C5 515 aa21.45■■□□□ 1.02
COPS7A-204ENST00000534947 WTIPA6NIX2 430 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 NUTM2BA6NNL0 878 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 NUTM2EB1AL46 878 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 TOP1P11387 765 aaKnown RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 NUTM2AQ8IVF1 878 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 PYM1Q9BRP8 204 aaKnown RBP21.45■■□□□ 1.02
COPS7A-204ENST00000534947 BTAF1O14981 1849 aa21.44■■□□□ 1.02
COPS7A-204ENST00000534947 PLEKHA8P1O95397 391 aa21.44■■□□□ 1.02
COPS7A-204ENST00000534947 SLFN14P0C7P3 912 aa21.44■■□□□ 1.02
COPS7A-204ENST00000534947 ZNF592Q92610 1267 aa21.44■■□□□ 1.02
COPS7A-204ENST00000534947 CGNQ9P2M7 1197 aaKnown RBP21.44■■□□□ 1.02
COPS7A-204ENST00000534947 NHSQ6T4R5 1651 aa21.44■■□□□ 1.02
COPS7A-204ENST00000534947 ZPR1O75312 459 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 PRKCSHP14314 528 aaPredicted RBP21.43■■□□□ 1.02
COPS7A-204ENST00000534947 PLCD1P51178 756 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 SH3RF1Q7Z6J0 888 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 DPF2Q92785 391 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 IRS2Q9Y4H2 1338 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 SMIM22K7EJ46 135 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 PRR29P0C7W0 189 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 KIF5BP33176 963 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 NPY5RQ15761 445 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 ERO1AQ96HE7 468 aa21.43■■□□□ 1.02
COPS7A-204ENST00000534947 TBX2Q13207 712 aaPredicted RBP21.42■■□□□ 1.02
COPS7A-204ENST00000534947 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
COPS7A-204ENST00000534947 L2HGDHQ9H9P8 463 aa21.42■■□□□ 1.02
COPS7A-204ENST00000534947 NFE2L3Q9Y4A8 694 aa21.42■■□□□ 1.02
COPS7A-204ENST00000534947 PRDM1O75626 825 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 ATP2C1P98194 919 aaPredicted RBP21.41■■□□□ 1.02
COPS7A-204ENST00000534947 CCDC178Q5BJE1 867 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 GSDMAQ96QA5 445 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 FEZ1Q99689 392 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 SCG2P13521 617 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 KLRK1P26718 216 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 PPP4R3BQ5MIZ7 849 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 TTC38Q5R3I4 469 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 ANKS1AQ92625 1134 aa21.41■■□□□ 1.02
COPS7A-204ENST00000534947 ARHGAP6O43182 974 aa21.4■■□□□ 1.02
COPS7A-204ENST00000534947 ATP2B1P20020 1258 aa21.4■■□□□ 1.02
COPS7A-204ENST00000534947 PFKFB3Q16875 520 aaPredicted RBP21.4■■□□□ 1.02
COPS7A-204ENST00000534947 SRBD1Q8N5C6 995 aaKnown RBP21.4■■□□□ 1.02
COPS7A-204ENST00000534947 SH3GLB2Q9NR46 395 aa21.4■■□□□ 1.02
COPS7A-204ENST00000534947 INTS13Q9NVM9 706 aa21.4■■□□□ 1.02
COPS7A-204ENST00000534947 ROBO3Q96MS0 1386 aa21.4■■□□□ 1.02
COPS7A-204ENST00000534947 SLU7O95391 586 aaKnown RBP21.39■■□□□ 1.02
COPS7A-204ENST00000534947 CALML3P27482 149 aa21.39■■□□□ 1.02
COPS7A-204ENST00000534947 PRDX5P30044 214 aa21.39■■□□□ 1.02
COPS7A-204ENST00000534947 TM4SF1P30408 202 aa21.39■■□□□ 1.02
COPS7A-204ENST00000534947 FMR1Q06787 632 aaKnown RBP eCLIP21.39■■□□□ 1.02
COPS7A-204ENST00000534947 EARS2Q5JPH6 523 aaKnown RBP21.39■■□□□ 1.02
COPS7A-204ENST00000534947 USP49Q70CQ1 688 aa21.39■■□□□ 1.02
COPS7A-204ENST00000534947 DGKHQ86XP1 1220 aa21.39■■□□□ 1.02
COPS7A-204ENST00000534947 FAM177A1Q8N128 213 aaPredicted RBP21.39■■□□□ 1.02
COPS7A-204ENST00000534947 WDR66Q8TBY9 1149 aa21.39■■□□□ 1.02
COPS7A-204ENST00000534947 PHLPP2Q6ZVD8 1323 aa21.39■■□□□ 1.02
COPS7A-204ENST00000534947 TAF1LQ8IZX4 1826 aa21.39■■□□□ 1.01
COPS7A-204ENST00000534947 FAM205CA6NFA0 338 aa21.39■■□□□ 1.01
COPS7A-204ENST00000534947 SPECC1LQ69YQ0 1117 aa21.39■■□□□ 1.01
COPS7A-204ENST00000534947 PDILTQ8N807 584 aa21.39■■□□□ 1.01
COPS7A-204ENST00000534947 SYMPKQ92797 1274 aaKnown RBP21.39■■□□□ 1.01
COPS7A-204ENST00000534947 LEMD3Q9Y2U8 911 aa21.39■■□□□ 1.01
COPS7A-204ENST00000534947 RTCBQ9Y3I0 505 aaKnown RBP21.39■■□□□ 1.01
COPS7A-204ENST00000534947 GOLGA6L9A6NEM1 432 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 ZSCAN12O43309 604 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 CDK11BP21127 795 aaKnown RBP21.38■■□□□ 1.01
COPS7A-204ENST00000534947 ETF1P62495 437 aaKnown RBP21.38■■□□□ 1.01
COPS7A-204ENST00000534947 CERS3Q8IU89 383 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 PAGE5Q96GU1 130 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 LY75O60449 1722 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 SBF2Q86WG5 1849 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 TSPY2A6NKD2 308 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 STX10O60499 249 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 GSTO1P78417 241 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 DZIP1Q86YF9 867 aaKnown RBP21.38■■□□□ 1.01
COPS7A-204ENST00000534947 DHX58Q96C10 678 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 TFCP2L1Q9NZI6 479 aa21.38■■□□□ 1.01
COPS7A-204ENST00000534947 SRP68Q9UHB9 627 aaKnown RBP21.38■■□□□ 1.01
COPS7A-204ENST00000534947 MKRN1Q9UHC7 482 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms