RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FAAP100Q0VG06 881 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 CDKAL1Q5VV42 579 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 MAP1SQ66K74 1059 aaPredicted RBP2.01□□□□□ -2.09
COPB1-212ENST00000534771 CDC37L1Q7L3B6 337 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 PDZD3Q86UT5 571 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 EMILIN2Q9BXX0 1053 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 ATP13A1Q9HD20 1204 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 ABCB6Q9NP58 842 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 NPHS2Q9NP85 383 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 PRDM5Q9NQX1 630 aaPredicted RBP2.01□□□□□ -2.09
COPB1-212ENST00000534771 PICK1Q9NRD5 415 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 GPN3Q9UHW5 284 aaPredicted RBP2.01□□□□□ -2.09
COPB1-212ENST00000534771 BRPF3Q9ULD4 1205 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 MAPK8IP1Q9UQF2 711 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 IRAK3Q9Y616 596 aa2.01□□□□□ -2.09
COPB1-212ENST00000534771 WDR33Q9C0J8 1336 aaKnown RBP2□□□□□ -2.09
COPB1-212ENST00000534771 LTBP3Q9NS15 1303 aa2□□□□□ -2.09
COPB1-212ENST00000534771 FANCGO15287 622 aa2□□□□□ -2.09
COPB1-212ENST00000534771 GADD45BO75293 160 aaPredicted RBP2□□□□□ -2.09
COPB1-212ENST00000534771 ABL1P00519 1130 aa2□□□□□ -2.09
COPB1-212ENST00000534771 PDE3BQ13370 1112 aa2□□□□□ -2.09
COPB1-212ENST00000534771 PPM1JQ5JR12 505 aa2□□□□□ -2.09
COPB1-212ENST00000534771 SFRP5Q5T4F7 317 aa2□□□□□ -2.09
COPB1-212ENST00000534771 PRPF40BQ6NWY9 871 aaKnown RBP2□□□□□ -2.09
COPB1-212ENST00000534771 DTHD1Q6ZMT9 781 aa2□□□□□ -2.09
COPB1-212ENST00000534771 TTC6Q86TZ1 520 aa2□□□□□ -2.09
COPB1-212ENST00000534771 C12orf40Q86WS4 652 aa2□□□□□ -2.09
COPB1-212ENST00000534771 KCT2Q8NC54 265 aa2□□□□□ -2.09
COPB1-212ENST00000534771 GPBAR1Q8TDU6 330 aa2□□□□□ -2.09
COPB1-212ENST00000534771 MYLIPQ8WY64 445 aa2□□□□□ -2.09
COPB1-212ENST00000534771 UBE2FQ969M7 185 aa2□□□□□ -2.09
COPB1-212ENST00000534771 CCDC74AQ96AQ1 378 aa2□□□□□ -2.09
COPB1-212ENST00000534771 ACSBG1Q96GR2 724 aa2□□□□□ -2.09
COPB1-212ENST00000534771 LOXL4Q96JB6 756 aa2□□□□□ -2.09
COPB1-212ENST00000534771 SIGLEC10Q96LC7 697 aa2□□□□□ -2.09
COPB1-212ENST00000534771 ALPK1Q96QP1 1244 aa2□□□□□ -2.09
COPB1-212ENST00000534771 CEP89Q96ST8 783 aa2□□□□□ -2.09
COPB1-212ENST00000534771 DNAJC25Q9H1X3 360 aa2□□□□□ -2.09
COPB1-212ENST00000534771 ANO2Q9NQ90 1003 aa2□□□□□ -2.09
COPB1-212ENST00000534771 CSADQ9Y600 493 aa2□□□□□ -2.09
COPB1-212ENST00000534771 DCDC2CA8MYV0 355 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 H3BS24 57 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 LRIG2O94898 1065 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 ITGB3P05106 788 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 XRCC5P13010 732 aaKnown RBP1.99□□□□□ -2.09
COPB1-212ENST00000534771 NME2P22392 152 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 FCGRTP55899 365 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 ERVFC1P60507 584 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 PURAQ00577 322 aaKnown RBP1.99□□□□□ -2.09
COPB1-212ENST00000534771 RING1Q06587 406 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 ORC1Q13415 861 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 GRM2Q14416 872 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 THAP5Q7Z6K1 395 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 SULF2Q8IWU5 870 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 ZNF507Q8TCN5 953 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 CBX8Q9HC52 389 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 ZSWIM5Q9P217 1185 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 SERPINA10Q9UK55 444 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 TPX2Q9ULW0 747 aaKnown RBP1.99□□□□□ -2.09
COPB1-212ENST00000534771 ST14Q9Y5Y6 855 aa1.99□□□□□ -2.09
COPB1-212ENST00000534771 DNAJC25-GNG10A0A024R161 153 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 TMEM88BA6NKF7 163 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 PRR33A8MZF0 331 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 EIF1AYO14602 144 aaKnown RBP1.98□□□□□ -2.09
COPB1-212ENST00000534771 NDUFB5O43674 189 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 SLITRK5O94991 958 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 HPXP02790 462 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 CYP7A1P22680 504 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 NTF4P34130 210 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 KCNC1P48547 511 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 HK2P52789 917 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 ZNF252P-AS1Q0IIN9 211 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 RALGPS1Q5JS13 557 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 EPHA10Q5JZY3 1008 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 MPRIPQ6WCQ1 1025 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 C22orf34Q6ZV56 151 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 MFSD4AQ8N468 514 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 MFSD2AQ8NA29 543 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 RIN3Q8TB24 985 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 TMC1Q8TDI8 760 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 STK35Q8TDR2 534 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 EPS8L3Q8TE67 593 aaKnown RBP1.98□□□□□ -2.09
COPB1-212ENST00000534771 CITED4Q96RK1 184 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 NIF3L1Q9GZT8 377 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 IKZF4Q9H2S9 585 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 EPB41L4AQ9HCS5 686 aaPredicted RBP1.98□□□□□ -2.09
COPB1-212ENST00000534771 NLRP2Q9NX02 1062 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 CACNA2D2Q9NY47 1150 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 SLAMF8Q9P0V8 285 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 TMEM59LQ9UK28 342 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 AKAP2Q9Y2D5 859 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 SAMM50Q9Y512 469 aa1.98□□□□□ -2.09
COPB1-212ENST00000534771 ICMTO60725 284 aa1.97□□□□□ -2.09
COPB1-212ENST00000534771 TRIM37O94972 964 aa1.97□□□□□ -2.09
COPB1-212ENST00000534771 CBX7O95931 251 aa1.97□□□□□ -2.09
COPB1-212ENST00000534771 BMP6P22004 513 aa1.97□□□□□ -2.09
COPB1-212ENST00000534771 KIR3DL1P43629 444 aa1.97□□□□□ -2.09
COPB1-212ENST00000534771 FGD1P98174 961 aa1.97□□□□□ -2.09
COPB1-212ENST00000534771 TNK2Q07912 1038 aa1.97□□□□□ -2.09
COPB1-212ENST00000534771 ZNF211Q13398 564 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms