RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 GBP1P32455 592 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 CRKP46108 304 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 LRRFIP1Q32MZ4 808 aaKnown RBP4.01□□□□□ -1.77
CSDE1-216ENST00000534389 SGO2Q562F6 1265 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 XP32Q5T750 250 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.01□□□□□ -1.77
CSDE1-216ENST00000534389 PNISRQ8TF01 805 aaKnown RBP4.01□□□□□ -1.77
CSDE1-216ENST00000534389 SEC16BQ96JE7 1060 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 MEGF10Q96KG7 1140 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 MYRFLQ96LU7 910 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 DRC1Q96MC2 740 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 TBC1D32Q96NH3 1257 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 SPOCK3Q9BQ16 436 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 TRIM55Q9BYV6 548 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 DISC1Q9NRI5 854 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 IGSF5Q9NSI5 407 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 REV1Q9UBZ9 1251 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 RCAN3Q9UKA8 241 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 PPT2Q9UMR5 302 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 CORINQ9Y5Q5 1042 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 MRVI1Q9Y6F6 885 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 TONSLQ96HA7 1378 aa4.01□□□□□ -1.77
CSDE1-216ENST00000534389 TOP2AP11388 1531 aaKnown RBP4□□□□□ -1.77
CSDE1-216ENST00000534389 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 FAM86C2PA6NEL3 165 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 TIAF1O95411 115 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 PROCP04070 461 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 ATF4P18848 351 aaPredicted RBP4□□□□□ -1.77
CSDE1-216ENST00000534389 GJA8P48165 433 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 DOC2BQ14184 412 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 C20orf194Q5TEA3 1177 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 CDPF1Q6NVV7 123 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 CYFIP1Q7L576 1253 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 SLITRK4Q8IW52 837 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 FAM20CQ8IXL6 584 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 CKAP2LQ8IYA6 745 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 REXO1Q8N1G1 1221 aaKnown RBP4□□□□□ -1.77
CSDE1-216ENST00000534389 FBXL6Q8N531 539 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 SLC43A3Q8NBI5 491 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 ISL2Q96A47 359 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 UBL7Q96S82 380 aaPredicted RBP4□□□□□ -1.77
CSDE1-216ENST00000534389 DPH2Q9BQC3 489 aaPredicted RBP4□□□□□ -1.77
CSDE1-216ENST00000534389 TINF2Q9BSI4 451 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 LRRC3Q9BY71 257 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 ATG3Q9NT62 314 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 TPX2Q9ULW0 747 aaKnown RBP4□□□□□ -1.77
CSDE1-216ENST00000534389 RAXQ9Y2V3 346 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 TACC3Q9Y6A5 838 aa4□□□□□ -1.77
CSDE1-216ENST00000534389 LRPPRCP42704 1394 aaKnown RBP4□□□□□ -1.77
CSDE1-216ENST00000534389 NLRP1Q9C000 1473 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 KIF7Q2M1P5 1343 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 IGHA1P01876 353 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 GARTP22102 1010 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 MRE11P49959 708 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 TERF1P54274 439 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 CLCQ05315 142 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 ARSHQ5FYA8 562 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 DUSP27Q5VZP5 1158 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 ZNF746Q6NUN9 644 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-216ENST00000534389 CLEC10AQ8IUN9 316 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 OR6P1Q8NGX9 317 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 PMFBP1Q8TBY8 1022 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 RASGRP4Q8TDF6 673 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 FAM46AQ96IP4 442 aaKnown RBP3.99□□□□□ -1.77
CSDE1-216ENST00000534389 TMEM87BQ96K49 555 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 MAP7D2Q96T17 732 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 MIPEPQ99797 713 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 FOXQ1Q9C009 403 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 SEMA6CQ9H3T2 930 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 GRPEL1Q9HAV7 217 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 KCNQ5Q9NR82 932 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 GMIPQ9P107 970 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 ADAM30Q9UKF2 790 aa3.99□□□□□ -1.77
CSDE1-216ENST00000534389 POLR3KQ9Y2Y1 108 aaPredicted RBP3.99□□□□□ -1.77
CSDE1-216ENST00000534389 DENND4BO75064 1496 aaPredicted RBP3.98□□□□□ -1.77
CSDE1-216ENST00000534389 PTPRKQ15262 1439 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 SPATA31E1Q6ZUB1 1445 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 GFRA2O00451 464 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 LRIG2O94898 1065 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 CYP7A1P22680 504 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 CDK5R2Q13319 367 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 NBPF8Q3BBV2 869 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 CYP27C1Q4G0S4 372 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 TNNI3KQ59H18 835 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 PRAMEF13Q5VWM6 474 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 LARP1BQ659C4 914 aaKnown RBP3.98□□□□□ -1.77
CSDE1-216ENST00000534389 SLC6A19Q695T7 634 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 ARMCX6Q7L4S7 300 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 NLRC3Q7RTR2 1065 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 DZIP1LQ8IYY4 767 aaKnown RBP3.98□□□□□ -1.77
CSDE1-216ENST00000534389 TOP6BLQ8N6T0 577 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 MFSD2AQ8NA29 543 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 TMEM40Q8WWA1 233 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 SECISBP2LQ93073 1101 aaKnown RBP3.98□□□□□ -1.77
CSDE1-216ENST00000534389 CCDC74BQ96LY2 380 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 MFSD14AQ96MC6 490 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 PPP1R9BQ96SB3 815 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 OSBPL1AQ9BXW6 950 aa3.98□□□□□ -1.77
CSDE1-216ENST00000534389 SLKQ9H2G2 1235 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms