RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 DNAJC8O75937 253 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-219ENST00000531050 UPP2O95045 317 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 CTCFP49711 727 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-219ENST00000531050 SPECC1Q5M775 1068 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 EMC10Q5UCC4 262 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 CREB3L3Q68CJ9 461 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 RASGRP2Q7LDG7 609 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 CCDC170Q8IYT3 715 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 CNKSR1Q969H4 720 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 BICD1Q96G01 975 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 MMS19Q96T76 1030 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 DNAAF2Q9NVR5 837 aaKnown RBP8.74□□□□□ -1.01
PTPRK-219ENST00000531050 BAIAP2L1Q9UHR4 511 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 MAP3K5Q99683 1374 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 A0A1W2PQ27 194 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 A0A1W2PQ64 194 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 A0A1W2PQD8 194 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 GNAI2P04899 355 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 ANKRD1Q15327 319 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 LRRC23Q53EV4 343 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-219ENST00000531050 NUGGCQ68CJ6 796 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 SND1Q7KZF4 910 aaKnown RBP eCLIP8.74□□□□□ -1.01
PTPRK-219ENST00000531050 CYFIP2Q96F07 1278 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 PANX2Q96RD6 677 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 LZTS2Q9BRK4 669 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 ALDH8A1Q9H2A2 487 aaPredicted RBP8.74□□□□□ -1.01
PTPRK-219ENST00000531050 PIDD1Q9HB75 910 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 IL1RAPL2Q9NP60 686 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 FAM184BQ9ULE4 1060 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 L3MBTL1Q9Y468 752 aa8.74□□□□□ -1.01
PTPRK-219ENST00000531050 PDLIM1O00151 329 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 NPM3O75607 178 aaKnown RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 POLA2Q14181 598 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 RASA3Q14644 834 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 TRAPPC11Q7Z392 1133 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 ILDR1Q86SU0 546 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 TAX1BP1Q86VP1 789 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 KIAA0825Q8IV33 1275 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 CABP1Q9NZU7 370 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 KDM6AO15550 1401 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 CPSF1Q10570 1443 aaKnown RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 SMIM24O75264 130 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 ATP6V1G1O75348 118 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 MYBL1P10243 752 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 ZKSCAN1P17029 563 aaPredicted RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 RPS6KB1P23443 525 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 APBA1Q02410 837 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 TMEM62Q0P6H9 643 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 CUL3Q13618 768 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 MYBPC3Q14896 1274 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 ATL3Q6DD88 541 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 ADALQ6DHV7 355 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 UBE3BQ7Z3V4 1068 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 CNTROBQ8N137 903 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 TMTC2Q8N394 836 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 TSEN2Q8NCE0 465 aaKnown RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 ACRBPQ8NEB7 543 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 TRIM4Q9C037 500 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 SIL1Q9H173 461 aa8.73□□□□□ -1.01
PTPRK-219ENST00000531050 RBM8AQ9Y5S9 174 aaKnown RBP8.73□□□□□ -1.01
PTPRK-219ENST00000531050 TPD52L2O43399 206 aaKnown RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 ATP8B2P98198 1209 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 NNTQ13423 1086 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 RIPK1Q13546 671 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 BYSLQ13895 437 aaKnown RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 DBN1Q16643 649 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 ACBD5Q5T8D3 534 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 KCTD16Q68DU8 428 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 NAA16Q6N069 864 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 RANBP17Q9H2T7 1088 aaKnown RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 PCMTD2Q9NV79 361 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 TUBE1Q9UJT0 475 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 TAF6LQ9Y6J9 622 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 MON2Q7Z3U7 1717 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 MAP2P11137 1827 aaKnown RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 GPR75-ASB3A0A0A6YYF3 556 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 DPPA5A6NC42 116 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 LRRC10BA6NIK2 292 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 AKR1B15C9JRZ8 316 aaPredicted RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 SLC27A2O14975 620 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 DIAPH2O60879 1101 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 POLD1P28340 1107 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 ZRSR2Q15696 482 aaKnown RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 NBPF14Q5TI25 921 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 ALS2CLQ60I27 953 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 BLOC1S2Q6QNY1 142 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 PHACTR1Q9C0D0 580 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 NOP53Q9NZM5 478 aaKnown RBP8.72□□□□□ -1.01
PTPRK-219ENST00000531050 ASB3Q9Y575 518 aa8.72□□□□□ -1.01
PTPRK-219ENST00000531050 CEMIPQ8WUJ3 1361 aa8.71□□□□□ -1.01
PTPRK-219ENST00000531050 CRYBG1Q9Y4K1 1723 aa8.71□□□□□ -1.01
PTPRK-219ENST00000531050 M0R2C6 588 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 PSMA5P28066 241 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 MDH1P40925 334 aaKnown RBP8.71□□□□□ -1.02
PTPRK-219ENST00000531050 FOSBP53539 338 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 HSP90AA4PQ58FG1 418 aa8.71□□□□□ -1.02
PTPRK-219ENST00000531050 MSL1Q68DK7 614 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms